Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:54690145-54750161

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf44 13 54679399 to 54693907 14508 - protein coding gene ring finger protein 44
Tssr122636 13 54691786 to 54691793 7 - TSS region transcription start site region 122636
Cpgi5647 13 54693345 to 54694710 1365 CpG island CpG island 5647
Tssr122637 13 54693794 to 54693888 94 - TSS region transcription start site region 122637
Tssr119889 13 54701435 to 54701446 11 + TSS region transcription start site region 119889
Tssr119890 13 54701457 to 54701479 22 + TSS region transcription start site region 119890
Cdhr2 13 54701463 to 54736662 35199 + protein coding gene cadherin-related family member 2
Tssr119891 13 54717608 to 54717617 9 + TSS region transcription start site region 119891
Tssr119892 13 54718560 to 54718572 12 + TSS region transcription start site region 119892
Tssr119893 13 54720145 to 54720161 16 + TSS region transcription start site region 119893
Tssr119894 13 54726791 to 54726802 11 + TSS region transcription start site region 119894
Tssr119895 13 54730243 to 54730246 3 + TSS region transcription start site region 119895
Tssr119896 13 54731718 to 54731728 10 + TSS region transcription start site region 119896
Tssr119897 13 54731775 to 54731790 15 + TSS region transcription start site region 119897
Tssr4074 13 54731819 to 54731828 9 + TSS region transcription start site region 4074
Tssr119898 13 54732029 to 54732053 24 + TSS region transcription start site region 119898
Gprin1 13 54736671 to 54749874 13203 - protein coding gene G protein-regulated inducer of neurite outgrowth 1
Cpgi5648 13 54737122 to 54738998 1876 CpG island CpG island 5648
9530001D17Rik 13 54741951 to 54742331 380 unclassified gene RIKEN cDNA 9530001D17 gene
Cpgi5649 13 54748861 to 54750295 1434 CpG island CpG island 5649
Tssr122638 13 54749613 to 54749625 12 - TSS region transcription start site region 122638
Tssr122639 13 54749627 to 54749697 70 - TSS region transcription start site region 122639
Tssr122640 13 54749849 to 54749893 44 - TSS region transcription start site region 122640
Tssr122641 13 54749908 to 54749920 12 - TSS region transcription start site region 122641