MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:53425703-53626059

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20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm2762	13	53393689 to 53455630	61941	+	lincRNA gene	predicted gene 2762
Tssr119834	13	53441907 to 53441912	5	+	TSS region	transcription start site region 119834
Tssr119835	13	53448251 to 53448257	6	+	TSS region	transcription start site region 119835
Gm33763	13	53461317 to 53478244	16927	+	lncRNA gene	predicted gene, 33763
Cpgi5621	13	53461903 to 53462789	886		CpG island	CpG island 5621
Cpgi5622	13	53465273 to 53465814	541		CpG island	CpG island 5622
Msx2	13	53466881 to 53472780	5899	-	protein coding gene	msh homeobox 2
Cpgi5623	13	53472121 to 53473156	1035		CpG island	CpG island 5623
Tssr122586	13	53472712 to 53472725	13	-	TSS region	transcription start site region 122586
Tssr122587	13	53472735 to 53472787	52	-	TSS region	transcription start site region 122587
Tssr122588	13	53472800 to 53472810	10	-	TSS region	transcription start site region 122588
Tssr122589	13	53472822 to 53472850	28	-	TSS region	transcription start site region 122589
Cpgi5624	13	53475606 to 53476448	842		CpG island	CpG island 5624
Gm40951	13	53478351 to 53481973	3622	+	lncRNA gene	predicted gene, 40951
Gm33873	13	53482624 to 53505790	23166	+	lncRNA gene	predicted gene, 33873
Gm40952	13	53501857 to 53504386	2529	-	lncRNA gene	predicted gene, 40952
Cpgi5625	13	53504744 to 53505143	399		CpG island	CpG island 5625
Gm34022	13	53506535 to 53534643	28108	-	lincRNA gene	predicted gene, 34022
Gm5449	13	53525703 to 53526059	356	+	pseudogene	predicted pseudogene 5449
Tssr122590	13	53533239 to 53533286	47	-	TSS region	transcription start site region 122590