MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:52988654-53249113

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D13Nds1	13	52990784 to 52990868	84		DNA segment	DNA segment, Chr 13, Nuffield Department of Surgery 1
Heal7	13	52990784 to 52990868	84		QTL	wound healing/regeneration 7
Tssr119830	13	53001861 to 53001870	9	+	TSS region	transcription start site region 119830
Gm33519	13	53008090 to 53018019	9929	-	lncRNA gene	predicted gene, 33519
Gm33424	13	53016202 to 53018185	1983	+	lincRNA gene	predicted gene, 33424
Oit4	13	53018057 to 53018426	369		unclassified gene	oncoprotein induced transcript 4
Gm48336	13	53028918 to 53035090	6172	+	lincRNA gene	predicted gene, 48336
Cpgi5614	13	53049308 to 53049740	432		CpG island	CpG island 5614
Ror2	13	53109317 to 53286109	176792	-	protein coding gene	receptor tyrosine kinase-like orphan receptor 2
Cpgi5615	13	53110234 to 53110615	381		CpG island	CpG island 5615
Cpgi5616	13	53111021 to 53111564	543		CpG island	CpG island 5616
Cpgi5617	13	53118654 to 53119113	459		CpG island	CpG island 5617
Tssr122574	13	53146642 to 53146644	2	-	TSS region	transcription start site region 122574
Tssr4073	13	53161156 to 53161158	2	+	TSS region	transcription start site region 4073
Tssr122575	13	53163476 to 53163480	4	-	TSS region	transcription start site region 122575
Cpgi5618	13	53169125 to 53169369	244		CpG island	CpG island 5618
Tssr122576	13	53184118 to 53184123	5	-	TSS region	transcription start site region 122576
Tssr119831	13	53184502 to 53184513	11	+	TSS region	transcription start site region 119831
C330026N13Rik	13	53185865 to 53186939	1074		unclassified non-coding RNA gene	RIKEN cDNA C330026N13 gene