Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:52772415-52972520

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hpi1 13 4364026 to 52947604 48583578 QTL hapatic PMN infiltration 1
Cpgi5610 13 52793542 to 52793725 183 CpG island CpG island 5610
Tssr122562 13 52820243 to 52820255 12 - TSS region transcription start site region 122562
Gm33315 13 52828125 to 52845595 17470 + lncRNA gene predicted gene, 33315
Auh 13 52835119 to 52929681 94562 - protein coding gene AU RNA binding protein/enoyl-coenzyme A hydratase
Tssr122563 13 52843432 to 52843433 1 - TSS region transcription start site region 122563
D13Mit140 13 52872415 to 52872520 105 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 140
Cpgi5611 13 52929167 to 52929945 778 CpG island CpG island 5611
Tssr122564 13 52929484 to 52929497 13 - TSS region transcription start site region 122564
Tssr122565 13 52929618 to 52929629 11 - TSS region transcription start site region 122565
Tssr122566 13 52929640 to 52929678 38 - TSS region transcription start site region 122566
Acsns2 13 52947494 to 52947604 110 QTL Angiostrongylus costaricensis nematode susceptibility 2
D13Mit248 13 52947494 to 52947604 110 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 248
Pfat3 13 52947494 to 52947604 110 QTL predicted fat percentage 3
Gm40950 13 52954388 to 52967120 12732 + lncRNA gene predicted gene, 40950
n-R5s54 13 52964621 to 52964732 111 - rRNA gene nuclear encoded rRNA 5S 54
Nfil3 13 52967209 to 52981073 13864 - protein coding gene nuclear factor, interleukin 3, regulated