Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:51488301-51648333

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shc3 13 51431041 to 51567084 136043 - protein coding gene src homology 2 domain-containing transforming protein C3
Cpgi5596 13 51566556 to 51567912 1356 CpG island CpG island 5596
Tssr122504 13 51567750 to 51567773 23 - TSS region transcription start site region 122504
Tssr122505 13 51567780 to 51567836 56 - TSS region transcription start site region 122505
Tssr122506 13 51568052 to 51568094 42 - TSS region transcription start site region 122506
Tssr122507 13 51568301 to 51568333 32 - TSS region transcription start site region 122507
Cpgi5597 13 51568728 to 51569331 603 CpG island CpG island 5597
Tssr122508 13 51569076 to 51569116 40 - TSS region transcription start site region 122508
Tssr122509 13 51569171 to 51569192 21 - TSS region transcription start site region 122509
Tssr122510 13 51569341 to 51569345 4 - TSS region transcription start site region 122510
Tssr122511 13 51569437 to 51569467 30 - TSS region transcription start site region 122511
Cpgi5598 13 51594793 to 51595323 530 CpG island CpG island 5598
Tssr119758 13 51642682 to 51642690 8 + TSS region transcription start site region 119758
Cpgi5599 13 51644787 to 51645842 1055 CpG island CpG island 5599
Tssr122512 13 51644894 to 51644899 5 - TSS region transcription start site region 122512
Cks2 13 51645232 to 51650660 5428 + protein coding gene CDC28 protein kinase regulatory subunit 2
Tssr119759 13 51645268 to 51645276 8 + TSS region transcription start site region 119759
Tssr119760 13 51645284 to 51645299 15 + TSS region transcription start site region 119760
Tssr119761 13 51645310 to 51645332 22 + TSS region transcription start site region 119761
Tssr119762 13 51645370 to 51645392 22 + TSS region transcription start site region 119762
Tssr119763 13 51645692 to 51645727 35 + TSS region transcription start site region 119763
Tssr119764 13 51645736 to 51645747 11 + TSS region transcription start site region 119764
Gm22806 13 51648199 to 51648334 135 + snoRNA gene predicted gene, 22806