Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:48663088-48863610

Filter by:
18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5567 13 48662285 to 48663991 1706 CpG island CpG island 5567
Barx1 13 48663036 to 48666507 3471 + protein coding gene BarH-like homeobox 1
Cpgi5568 13 48664886 to 48665453 567 CpG island CpG island 5568
Cpgi5569 13 48665504 to 48666433 929 CpG island CpG island 5569
Cpgi5570 13 48668403 to 48669574 1171 CpG island CpG island 5570
Cpgi5571 13 48672525 to 48672765 240 CpG island CpG island 5571
Gm36784 13 48708189 to 48734084 25895 + lncRNA gene predicted gene, 36784
Cpgi5572 13 48717234 to 48717466 232 CpG island CpG island 5572
Cpgi5573 13 48731146 to 48732140 994 CpG island CpG island 5573
Cpgi5574 13 48732631 to 48733061 430 CpG island CpG island 5574
D13Mit269 13 48749733 to 48749848 115 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 269
Rpl17-ps6 13 48763088 to 48763610 522 - pseudogene ribosomal protein L17, pseudogene 6
Phf2 13 48801750 to 48870885 69135 - protein coding gene PHD finger protein 2
Tssr122400 13 48819680 to 48819694 14 - TSS region transcription start site region 122400
Tssr122401 13 48819701 to 48819713 12 - TSS region transcription start site region 122401
Tssr122402 13 48819716 to 48819738 22 - TSS region transcription start site region 122402
Tssr122403 13 48819749 to 48819753 4 - TSS region transcription start site region 122403
D13Mit120 13 48829584 to 48829716 132 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 120