Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:47851412-48241608

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35991 13 47843815 to 47851943 8128 + lncRNA gene predicted gene, 35991
Gm40938 13 47902558 to 47948474 45916 - lncRNA gene predicted gene, 40938
G630093K05Rik 13 47910435 to 47934301 23866 + lincRNA gene RIKEN cDNA G630093K05 gene
4931429P17Rik 13 47960330 to 48018608 58278 - lincRNA gene RIKEN cDNA 4931429P17 gene
Twq4 13 47975634 to 47975634 0 QTL testis weight QTL 4
Tssr122382 13 47992392 to 47992406 14 - TSS region transcription start site region 122382
Gm36101 13 48031773 to 48042471 10698 + lincRNA gene predicted gene, 36101
Tssr119654 13 48031839 to 48031856 17 + TSS region transcription start site region 119654
A330033J07Rik 13 48044231 to 48262623 218392 - antisense lncRNA gene RIKEN cDNA A330033J07 gene
Cpgi5556 13 48046412 to 48046608 196 CpG island CpG island 5556
Cpgi5557 13 48082389 to 48082630 241 CpG island CpG island 5557
Cpgi5558 13 48086771 to 48087019 248 CpG island CpG island 5558
Gm36346 13 48107897 to 48111641 3744 - lincRNA gene predicted gene, 36346
Gm36183 13 48227702 to 48241412 13710 + lncRNA gene predicted gene, 36183
Cpgi5559 13 48227722 to 48228149 427 CpG island CpG island 5559
Gm49291 13 48239054 to 48262591 23537 - lincRNA gene predicted gene, 49291