Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:46499792-46719801

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5539 13 46501783 to 46502633 850 CpG island CpG island 5539
Tssr119597 13 46501859 to 46501885 26 + TSS region transcription start site region 119597
Tssr119598 13 46501898 to 46501916 18 + TSS region transcription start site region 119598
Cap2 13 46501903 to 46650281 148378 + protein coding gene CAP, adenylate cyclase-associated protein, 2 (yeast)
Tssr119599 13 46502037 to 46502048 11 + TSS region transcription start site region 119599
Tssr119600 13 46502049 to 46502107 58 + TSS region transcription start site region 119600
Tssr119601 13 46502113 to 46502140 27 + TSS region transcription start site region 119601
Tssr119602 13 46502141 to 46502187 46 + TSS region transcription start site region 119602
Tssr122343 13 46502787 to 46502794 7 - TSS region transcription start site region 122343
Tssr119603 13 46502889 to 46502914 25 + TSS region transcription start site region 119603
D13Mit181 13 46508401 to 46508536 135 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 181
Gm24915 13 46518684 to 46518761 77 + rRNA gene predicted gene, 24915
Gm47523 13 46605327 to 46619780 14453 - antisense lncRNA gene predicted gene, 47523
Tssr119604 13 46609544 to 46609574 30 + TSS region transcription start site region 119604
Cpgi5540 13 46609631 to 46609857 226 CpG island CpG island 5540
Tssr119605 13 46609792 to 46609801 9 + TSS region transcription start site region 119605
Cpgi5541 13 46619729 to 46619932 203 CpG island CpG island 5541
Tssr119606 13 46638226 to 46638230 4 + TSS region transcription start site region 119606
Cpgi5542 13 46669144 to 46670494 1350 CpG island CpG island 5542
Tssr119607 13 46669445 to 46669501 56 + TSS region transcription start site region 119607
Tssr4059 13 46669510 to 46669515 5 + TSS region transcription start site region 4059
Tssr119608 13 46669517 to 46669545 28 + TSS region transcription start site region 119608
Fam8a1 13 46669522 to 46678056 8534 + protein coding gene family with sequence similarity 8, member A1
Tssr119609 13 46669571 to 46669582 11 + TSS region transcription start site region 119609
Nup153 13 46679902 to 46727849 47947 - protein coding gene nucleoporin 153
Tssr122344 13 46696851 to 46696898 47 - TSS region transcription start site region 122344