Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:43298625-43498695

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gfod1 13 43195245 to 43304172 108927 - protein coding gene glucose-fructose oxidoreductase domain containing 1
Cpgi5511 13 43302885 to 43304938 2053 CpG island CpG island 5511
Tssr122251 13 43304118 to 43304130 12 - TSS region transcription start site region 122251
Tssr122252 13 43304131 to 43304146 15 - TSS region transcription start site region 122252
Tssr122253 13 43304153 to 43304213 60 - TSS region transcription start site region 122253
Tssr122254 13 43304299 to 43304309 10 - TSS region transcription start site region 122254
D13Mit178 13 43356678 to 43356819 141 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 178
Cpgi5512 13 43365371 to 43365927 556 CpG island CpG island 5512
Tssr119499 13 43365458 to 43365522 64 + TSS region transcription start site region 119499
Sirt5 13 43365496 to 43395203 29707 + protein coding gene sirtuin 5
Tssr119500 13 43365616 to 43365657 41 + TSS region transcription start site region 119500
Tssr122255 13 43398182 to 43398186 4 - TSS region transcription start site region 122255
Cpgi5513 13 43398226 to 43398973 747 CpG island CpG island 5513
Tssr119501 13 43398375 to 43398402 27 + TSS region transcription start site region 119501
Nol7 13 43398376 to 43402858 4482 + protein coding gene nucleolar protein 7
Tssr119502 13 43398625 to 43398695 70 + TSS region transcription start site region 119502
Ranbp9 13 43402675 to 43481282 78607 - protein coding gene RAN binding protein 9
Gm47597 13 43417534 to 43417865 331 + pseudogene predicted gene, 47597
Tssr122256 13 43423424 to 43423432 8 - TSS region transcription start site region 122256
Gm26064 13 43425742 to 43425850 108 - snRNA gene predicted gene, 26064
Tssr122257 13 43435212 to 43435213 1 - TSS region transcription start site region 122257
Tssr122258 13 43478892 to 43478907 15 - TSS region transcription start site region 122258
Cpgi5514 13 43480036 to 43481822 1786 CpG island CpG island 5514
Tssr122259 13 43480973 to 43481005 32 - TSS region transcription start site region 122259
Tssr122260 13 43481021 to 43481038 17 - TSS region transcription start site region 122260
Tssr122261 13 43481044 to 43481049 5 - TSS region transcription start site region 122261
Tssr122262 13 43481056 to 43481067 11 - TSS region transcription start site region 122262
Tssr122263 13 43481081 to 43481095 14 - TSS region transcription start site region 122263
Tssr122264 13 43481101 to 43481108 7 - TSS region transcription start site region 122264
Tssr122265 13 43481173 to 43481191 18 - TSS region transcription start site region 122265
Tssr122266 13 43481221 to 43481325 104 - TSS region transcription start site region 122266
Tssr122267 13 43481455 to 43481515 60 - TSS region transcription start site region 122267
Gm32878 13 43489504 to 43494756 5252 + lncRNA gene predicted gene, 32878
Tssr119503 13 43493991 to 43493994 3 + TSS region transcription start site region 119503