Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:4126400-5386425

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Akr1c18 13 4132615 to 4150651 18036 - protein coding gene aldo-keto reductase family 1, member C18
Tssr121297 13 4150633 to 4150653 20 - TSS region transcription start site region 121297
Tssr121298 13 4150659 to 4150673 14 - TSS region transcription start site region 121298
Gm47925 13 4166503 to 4172845 6342 + lincRNA gene predicted gene, 47925
Gm2123 13 4168646 to 4170980 2334 - pseudogene predicted gene 2123
Tssr118217 13 4191163 to 4191200 37 + TSS region transcription start site region 118217
Akr1c13 13 4191166 to 4205604 14438 + protein coding gene aldo-keto reductase family 1, member C13
Tssr118218 13 4191208 to 4191226 18 + TSS region transcription start site region 118218
Tssr118219 13 4191228 to 4191242 14 + TSS region transcription start site region 118219
D13Mit235 13 4220992 to 4221137 145 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 235
n-TKctt6 13 4224148 to 4224220 72 - tRNA gene nuclear encoded tRNA lysine 6 (anticodon CTT)
Tssr118220 13 4228682 to 4228727 45 + TSS region transcription start site region 118220
Akr1c19 13 4233503 to 4248361 14858 + protein coding gene aldo-keto reductase family 1, member C19
Tssr118221 13 4233730 to 4233758 28 + TSS region transcription start site region 118221
Tssr118222 13 4233786 to 4233797 11 + TSS region transcription start site region 118222
Marcksl1-ps4 13 4248735 to 4249025 290 + pseudogene MARCKS-like 1, pseudogene 4
Tssr118223 13 4249705 to 4249709 4 + TSS region transcription start site region 118223
Gm40656 13 4255171 to 4258461 3290 + lncRNA gene predicted gene, 40656
Akr1c12 13 4268172 to 4279399 11227 - protein coding gene aldo-keto reductase family 1, member C12
Tssr121299 13 4279336 to 4279353 17 - TSS region transcription start site region 121299
Tssr121300 13 4279357 to 4279373 16 - TSS region transcription start site region 121300
Tssr121301 13 4279390 to 4279409 19 - TSS region transcription start site region 121301
Tssr121302 13 4279420 to 4279450 30 - TSS region transcription start site region 121302
D13Mit236 13 4364026 to 4364122 96 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 236
Hpi1 13 4364026 to 52947604 48583578 QTL hapatic PMN infiltration 1
Gm9973 13 4364550 to 4391259 26709 - lncRNA gene predicted gene 9973
Gm47951 13 4368681 to 4372417 3736 + pseudogene predicted gene, 47951
Tssr121303 13 4391236 to 4391249 13 - TSS region transcription start site region 121303
Akr1c6 13 4434311 to 4457530 23219 + protein coding gene aldo-keto reductase family 1, member C6
Tssr118224 13 4434337 to 4434388 51 + TSS region transcription start site region 118224
Tssr118225 13 4436094 to 4436132 38 + TSS region transcription start site region 118225
Tssr118226 13 4439400 to 4439408 8 + TSS region transcription start site region 118226
Gm48010 13 4465680 to 4466566 886 - lincRNA gene predicted gene, 48010
Akr1c20 13 4486849 to 4523345 36496 - protein coding gene aldo-keto reductase family 1, member C20
Tssr121304 13 4523322 to 4523355 33 - TSS region transcription start site region 121304
Gm40657 13 4555411 to 4565781 10370 - lncRNA gene predicted gene, 40657
Tssr118227 13 4574075 to 4574088 13 + TSS region transcription start site region 118227
Akr1c21 13 4574075 to 4586541 12466 + protein coding gene aldo-keto reductase family 1, member C21
Akr1e1 13 4592490 to 4609164 16674 - protein coding gene aldo-keto reductase family 1, member E1
Tssr121305 13 4609122 to 4609189 67 - TSS region transcription start site region 121305
Tssr118228 13 4614126 to 4614127 1 + TSS region transcription start site region 118228
Rpl29-ps2 13 4614127 to 4614793 666 + pseudogene ribosomal protein L29, pseudogene 2
Tssr118229 13 4725579 to 4725594 15 + TSS region transcription start site region 118229
Gm40658 13 4725779 to 4745537 19758 + lincRNA gene predicted gene, 40658
Tssr121306 13 4756400 to 4756425 25 - TSS region transcription start site region 121306
Gm5444 13 4771651 to 4836485 64834 + lincRNA gene predicted gene 5444
Gm47450 13 4915714 to 4943052 27338 - lincRNA gene predicted gene, 47450
D13Mit158 13 4934018 to 4934159 141 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 158
Tssr118230 13 5155187 to 5155192 5 + TSS region transcription start site region 118230
Gm24790 13 5189803 to 5189934 131 - snoRNA gene predicted gene, 24790
Gm47451 13 5215791 to 5216178 387 - pseudogene predicted gene, 47451
Gm40659 13 5258802 to 5266034 7232 + lncRNA gene predicted gene, 40659