Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:23749282-23809294

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr118860 13 23751069 to 23751086 17 + TSS region transcription start site region 118860
Tssr118861 13 23751107 to 23751118 11 + TSS region transcription start site region 118861
Hist1h2ab 13 23751126 to 23751598 472 + protein coding gene histone cluster 1, H2ab
Tssr118862 13 23751203 to 23751207 4 + TSS region transcription start site region 118862
Gm44484 13 23751378 to 23751515 137 - miRNA gene predicted gene, 44484
Cpgi5374 13 23751502 to 23751656 154 CpG island CpG island 5374
Tssr121747 13 23752195 to 23752210 15 - TSS region transcription start site region 121747
Tssr118863 13 23752341 to 23752351 10 + TSS region transcription start site region 118863
Hist1h3b 13 23752380 to 23752840 460 + protein coding gene histone cluster 1, H3b
4930558J22Rik 13 23755822 to 23757620 1798 - antisense lncRNA gene RIKEN cDNA 4930558J22 gene
Cpgi5375 13 23756927 to 23757497 570 CpG island CpG island 5375
Tssr118864 13 23756984 to 23756995 11 + TSS region transcription start site region 118864
Hist1h4b 13 23757013 to 23757409 396 + protein coding gene histone cluster 1, H4b
Tssr121748 13 23757603 to 23757629 26 - TSS region transcription start site region 121748
Cpgi5376 13 23760679 to 23761974 1295 CpG island CpG island 5376
Hist1h4a 13 23760795 to 23761249 454 - protein coding gene histone cluster 1, H4a
Tssr121749 13 23761167 to 23761188 21 - TSS region transcription start site region 121749
Tssr121750 13 23761209 to 23761216 7 - TSS region transcription start site region 121750
Tssr121751 13 23761223 to 23761236 13 - TSS region transcription start site region 121751
Hist1h3a 13 23761885 to 23762386 501 - protein coding gene histone cluster 1, H3a
Tssr121752 13 23762362 to 23762364 2 - TSS region transcription start site region 121752
Tssr121753 13 23762378 to 23762391 13 - TSS region transcription start site region 121753
Tssr121754 13 23763502 to 23763514 12 - TSS region transcription start site region 121754
Cpgi5377 13 23763518 to 23764081 563 CpG island CpG island 5377
Tssr121755 13 23763519 to 23763543 24 - TSS region transcription start site region 121755
Tssr118865 13 23763660 to 23763674 14 + TSS region transcription start site region 118865
Hist1h1a 13 23763666 to 23764406 740 + protein coding gene histone cluster 1, H1a
Tssr121756 13 23764197 to 23764220 23 - TSS region transcription start site region 121756
Trim38 13 23778500 to 23791731 13231 + protein coding gene tripartite motif-containing 38
Tssr118866 13 23779262 to 23779271 9 + TSS region transcription start site region 118866
Tssr118867 13 23779282 to 23779294 12 + TSS region transcription start site region 118867
Gm11337 13 23794768 to 23804599 9831 - antisense lncRNA gene predicted gene 11337
Tssr118868 13 23806986 to 23807012 26 + TSS region transcription start site region 118868
Slc17a2 13 23806993 to 23825180 18187 + protein coding gene solute carrier family 17 (sodium phosphate), member 2
Tssr118869 13 23807029 to 23807063 34 + TSS region transcription start site region 118869
Tssr118870 13 23807065 to 23807077 12 + TSS region transcription start site region 118870
Tssr118871 13 23807095 to 23807102 7 + TSS region transcription start site region 118871