Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:23731074-23761877

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr118853 13 23735152 to 23735183 31 + TSS region transcription start site region 118853
Cpgi5372 13 23738570 to 23740062 1492 CpG island CpG island 5372
Tssr118854 13 23738804 to 23738809 5 + TSS region transcription start site region 118854
Hist1h1c 13 23738807 to 23739531 724 + protein coding gene histone cluster 1, H1c
Tssr118855 13 23739190 to 23739198 8 + TSS region transcription start site region 118855
Tssr118856 13 23739828 to 23739935 107 + TSS region transcription start site region 118856
Tssr118857 13 23740126 to 23740175 49 + TSS region transcription start site region 118857
Tssr118858 13 23742301 to 23742317 16 + TSS region transcription start site region 118858
Hist1h3c 13 23745042 to 23745521 479 - protein coding gene histone cluster 1, H3c
Tssr121743 13 23745511 to 23745526 15 - TSS region transcription start site region 121743
Cpgi5373 13 23746074 to 23746877 803 CpG island CpG island 5373
Gm11336 13 23746166 to 23746499 333 - pseudogene predicted gene 11336
Gm44314 13 23746175 to 23746312 137 + miRNA gene predicted gene, 44314
Tssr121744 13 23746416 to 23746431 15 - TSS region transcription start site region 121744
Tssr121745 13 23746496 to 23746522 26 - TSS region transcription start site region 121745
Tssr121746 13 23746555 to 23746567 12 - TSS region transcription start site region 121746
Hist1h2bb 13 23746734 to 23747223 489 + protein coding gene histone cluster 1, H2bb
Tssr118859 13 23746745 to 23746763 18 + TSS region transcription start site region 118859
Tssr118860 13 23751069 to 23751086 17 + TSS region transcription start site region 118860
Tssr118861 13 23751107 to 23751118 11 + TSS region transcription start site region 118861
Hist1h2ab 13 23751126 to 23751598 472 + protein coding gene histone cluster 1, H2ab
Tssr118862 13 23751203 to 23751207 4 + TSS region transcription start site region 118862
Gm44484 13 23751378 to 23751515 137 - miRNA gene predicted gene, 44484
Cpgi5374 13 23751502 to 23751656 154 CpG island CpG island 5374
Tssr121747 13 23752195 to 23752210 15 - TSS region transcription start site region 121747
Tssr118863 13 23752341 to 23752351 10 + TSS region transcription start site region 118863
Hist1h3b 13 23752380 to 23752840 460 + protein coding gene histone cluster 1, H3b
4930558J22Rik 13 23755822 to 23757620 1798 - antisense lncRNA gene RIKEN cDNA 4930558J22 gene
Cpgi5375 13 23756927 to 23757497 570 CpG island CpG island 5375
Tssr118864 13 23756984 to 23756995 11 + TSS region transcription start site region 118864
Hist1h4b 13 23757013 to 23757409 396 + protein coding gene histone cluster 1, H4b
Tssr121748 13 23757603 to 23757629 26 - TSS region transcription start site region 121748
Cpgi5376 13 23760679 to 23761974 1295 CpG island CpG island 5376
Hist1h4a 13 23760795 to 23761249 454 - protein coding gene histone cluster 1, H4a
Tssr121749 13 23761167 to 23761188 21 - TSS region transcription start site region 121749
Tssr121750 13 23761209 to 23761216 7 - TSS region transcription start site region 121750
Tssr121751 13 23761223 to 23761236 13 - TSS region transcription start site region 121751