Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:23628473-23738959

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr118845 13 23652436 to 23652447 11 + TSS region transcription start site region 118845
Gm22452 13 23663021 to 23663124 103 + snRNA gene predicted gene, 22452
Gm24991 13 23682545 to 23682652 107 - rRNA gene predicted gene, 24991
Hist1h2ac 13 23683473 to 23683959 486 - protein coding gene histone cluster 1, H2ac
Gm44350 13 23683535 to 23683672 137 + miRNA gene predicted gene, 44350
Cpgi5369 13 23683908 to 23684247 339 CpG island CpG island 5369
Tssr121734 13 23683941 to 23683967 26 - TSS region transcription start site region 121734
Tssr118846 13 23684192 to 23684208 16 + TSS region transcription start site region 118846
Hist1h2bc 13 23684199 to 23692480 8281 + protein coding gene histone cluster 1, H2bc
Tssr121735 13 23684618 to 23684648 30 - TSS region transcription start site region 121735
Tssr118847 13 23685795 to 23685809 14 + TSS region transcription start site region 118847
Tssr118848 13 23692091 to 23692118 27 + TSS region transcription start site region 118848
Tssr118849 13 23695791 to 23695817 26 + TSS region transcription start site region 118849
Hist1h1t 13 23695811 to 23696545 734 + protein coding gene histone cluster 1, H1t
Tssr118850 13 23695823 to 23695833 10 + TSS region transcription start site region 118850
Cpgi5370 13 23698000 to 23698538 538 CpG island CpG island 5370
Hist1h4c 13 23698084 to 23698458 374 - protein coding gene histone cluster 1, H4c
Tssr121736 13 23698455 to 23698460 5 - TSS region transcription start site region 121736
Hfe 13 23702730 to 23710986 8256 - protein coding gene homeostatic iron regulator
Tssr121737 13 23704324 to 23704334 10 - TSS region transcription start site region 121737
Tssr121738 13 23706041 to 23706063 22 - TSS region transcription start site region 121738
Tssr4009 13 23706098 to 23706114 16 - TSS region transcription start site region 4009
Cpgi5371 13 23710536 to 23710779 243 CpG island CpG island 5371
Tssr118851 13 23710626 to 23710640 14 + TSS region transcription start site region 118851
Tssr118852 13 23710648 to 23710668 20 + TSS region transcription start site region 118852
Tssr121739 13 23710785 to 23710829 44 - TSS region transcription start site region 121739
Tssr121740 13 23710845 to 23710892 47 - TSS region transcription start site region 121740
Tssr121741 13 23710897 to 23710920 23 - TSS region transcription start site region 121741
Tssr4010 13 23710922 to 23710931 9 - TSS region transcription start site region 4010
Gm11338 13 23728727 to 23730103 1376 + pseudogene predicted gene 11338
Tssr121742 13 23729067 to 23729088 21 - TSS region transcription start site region 121742
Tssr118853 13 23735152 to 23735183 31 + TSS region transcription start site region 118853
Cpgi5372 13 23738570 to 23740062 1492 CpG island CpG island 5372
Tssr118854 13 23738804 to 23738809 5 + TSS region transcription start site region 118854
Hist1h1c 13 23738807 to 23739531 724 + protein coding gene histone cluster 1, H1c