Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:23463845-23523857

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Btn1a1 13 23456992 to 23465901 8909 - protein coding gene butyrophilin, subfamily 1, member A1
Cpgi5356 13 23463991 to 23464614 623 CpG island CpG island 5356
Tssr121705 13 23465768 to 23465773 5 - TSS region transcription start site region 121705
Tssr121706 13 23465839 to 23465859 20 - TSS region transcription start site region 121706
Tssr121707 13 23465862 to 23465870 8 - TSS region transcription start site region 121707
Tssr121708 13 23465872 to 23465879 7 - TSS region transcription start site region 121708
Tssr121709 13 23465895 to 23465914 19 - TSS region transcription start site region 121709
n-TYgta8 13 23467076 to 23467165 89 + tRNA gene nuclear encoded tRNA tyrosine 8 (anticodon GTA)
Tssr118821 13 23472985 to 23472996 11 + TSS region transcription start site region 118821
Btn2a2 13 23477676 to 23488857 11181 - protein coding gene butyrophilin, subfamily 2, member A2
Tssr118822 13 23492274 to 23492284 10 + TSS region transcription start site region 118822
Tssr118823 13 23493819 to 23493830 11 + TSS region transcription start site region 118823
Tssr118824 13 23493832 to 23493843 11 + TSS region transcription start site region 118824
Tssr118825 13 23493845 to 23493857 12 + TSS region transcription start site region 118825
n-TWcca3 13 23498106 to 23498177 71 + tRNA gene nuclear encoded tRNA trytophan 3 (anticodon CCA)
n-TMcat5 13 23500080 to 23500151 71 + tRNA gene nuclear encoded tRNA methionine 5 (anticodon CAT)
n-TRacg4 13 23500522 to 23500594 72 - tRNA gene nuclear encoded tRNA arginine 4 (anticodon ACG)
n-TSaga7 13 23500957 to 23501038 81 - tRNA gene nuclear encoded tRNA serine 7 (anticodon AGA)
n-TRtcg3 13 23503980 to 23504052 72 - tRNA gene nuclear encoded tRNA arginine 3 (anticodon TCG)
n-TWcca4 13 23506519 to 23506590 71 + tRNA gene nuclear encoded tRNA trytophan 4 (anticodon CCA)
n-TGgcc6 13 23517203 to 23517273 70 + tRNA gene nuclear encoded tRNA glycine 6 (anticodon GCC)
n-TMcat6 13 23517692 to 23517763 71 + tRNA gene nuclear encoded tRNA methionine 6 (anticodon CAT)
Cpgi5357 13 23518138 to 23518289 151 CpG island CpG island 5357
n-TStga1 13 23518146 to 23518227 81 + tRNA gene nuclear encoded tRNA serine 1 (anticodon TGA)
n-TQttg4 13 23519050 to 23519121 71 + tRNA gene nuclear encoded tRNA glutamine 4 (anticodon TTG)
n-TQttg5 13 23519613 to 23519684 71 + tRNA gene nuclear encoded tRNA glutamine 5 (anticodon TTG)
n-TSgct4 13 23521870 to 23521951 81 + tRNA gene nuclear encoded tRNA serine 4 (anticodon GCT)