MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:23431142-23461214

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
n-TAagc13	13	23431412 to 23431484	72	+	tRNA gene	nuclear encoded tRNA alanine 13 (anticodon AGC)
n-TYgta7	13	23432990 to 23433077	87	-	tRNA gene	nuclear encoded tRNA tyrosine 7 (anticodon GTA)
Gm40833	13	23433296 to 23434672	1376	-	lncRNA gene	predicted gene, 40833
n-TKctt11	13	23436340 to 23436412	72	+	tRNA gene	nuclear encoded tRNA lysine 11 (anticodon CTT)
n-TPagg3	13	23436994 to 23437065	71	-	tRNA gene	nuclear encoded tRNA proline 3 (anticodon AGG)
n-TIaat8	13	23438109 to 23438182	73	-	tRNA gene	nuclear encoded tRNA isoleucine 8 (anticodon AAT)
n-TAcgc10	13	23438697 to 23438768	71	-	tRNA gene	nuclear encoded tRNA alanine 10 (anticodon CGC)
Gm46404	13	23441822 to 23445935	4113	-	lincRNA gene	predicted gene, 46404
Cpgi5354	13	23445552 to 23446142	590		CpG island	CpG island 5354
Tssr121702	13	23445902 to 23445949	47	-	TSS region	transcription start site region 121702
n-TVcac9	13	23446142 to 23446214	72	-	tRNA gene	nuclear encoded tRNA valine 9 (anticodon CAC)
n-TRacg5	13	23446792 to 23446864	72	-	tRNA gene	nuclear encoded tRNA arginine 5 (anticodon ACG)
n-TTagt6	13	23450622 to 23450695	73	+	tRNA gene	nuclear encoded tRNA threonine 6 (anticodon AGT)
n-TLcag10	13	23453432 to 23453514	82	-	tRNA gene	nuclear encoded tRNA leucine 10 (anticodon CAG)
Cpgi5355	13	23453563 to 23453791	228		CpG island	CpG island 5355
Btn1a1	13	23456992 to 23465901	8909	-	protein coding gene	butyrophilin, subfamily 1, member A1
Tssr121703	13	23458437 to 23458439	2	-	TSS region	transcription start site region 121703