Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:23426994-23447065

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
n-TYgta5 13 23427095 to 23427180 85 - tRNA gene nuclear encoded tRNA tyrosine 5 (anticodon GTA)
C230035I16Rik 13 23427976 to 23431017 3041 - lincRNA gene RIKEN cDNA C230035I16 gene
n-TYgta6 13 23428738 to 23428826 88 - tRNA gene nuclear encoded tRNA tyrosine 6 (anticodon GTA)
Cpgi5353 13 23430712 to 23431101 389 CpG island CpG island 5353
Tssr121700 13 23430726 to 23430776 50 - TSS region transcription start site region 121700
Tssr121701 13 23430945 to 23430979 34 - TSS region transcription start site region 121701
n-TAagc13 13 23431412 to 23431484 72 + tRNA gene nuclear encoded tRNA alanine 13 (anticodon AGC)
n-TYgta7 13 23432990 to 23433077 87 - tRNA gene nuclear encoded tRNA tyrosine 7 (anticodon GTA)
Gm40833 13 23433296 to 23434672 1376 - lncRNA gene predicted gene, 40833
n-TKctt11 13 23436340 to 23436412 72 + tRNA gene nuclear encoded tRNA lysine 11 (anticodon CTT)
n-TPagg3 13 23436994 to 23437065 71 - tRNA gene nuclear encoded tRNA proline 3 (anticodon AGG)
n-TIaat8 13 23438109 to 23438182 73 - tRNA gene nuclear encoded tRNA isoleucine 8 (anticodon AAT)
n-TAcgc10 13 23438697 to 23438768 71 - tRNA gene nuclear encoded tRNA alanine 10 (anticodon CGC)
Gm46404 13 23441822 to 23445935 4113 - lincRNA gene predicted gene, 46404
Cpgi5354 13 23445552 to 23446142 590 CpG island CpG island 5354
Tssr121702 13 23445902 to 23445949 47 - TSS region transcription start site region 121702
n-TVcac9 13 23446142 to 23446214 72 - tRNA gene nuclear encoded tRNA valine 9 (anticodon CAC)
n-TRacg5 13 23446792 to 23446864 72 - tRNA gene nuclear encoded tRNA arginine 5 (anticodon ACG)