MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:23233880-23304474

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vmn1r-ps134	13	23241974 to 23242365	391	-	pseudogene	vomeronasal 1 receptor, pseudogene 134
Vmn1r223	13	23249238 to 23250323	1085	+	protein coding gene	vomeronasal 1 receptor 223
Gm33094	13	23251097 to 23259019	7922	-	lncRNA gene	predicted gene, 33094
Tssr118820	13	23260915 to 23260919	4	+	TSS region	transcription start site region 118820
Gm11331	13	23266534 to 23266821	287	+	pseudogene	predicted gene 11331
Vmn1r-ps135	13	23268880 to 23269474	594	+	pseudogene	vomeronasal 1 receptor, pseudogene 135
Cpgi5344	13	23270326 to 23270774	448		CpG island	CpG island 5344
n-TIaat15	13	23270421 to 23270516	95	-	tRNA gene	nuclear encoded tRNA isoleucine 15 (anticodon TAT)
4930557F10Rik	13	23276204 to 23313400	37196	-	lincRNA gene	RIKEN cDNA 4930557F10 gene
4933404K08Rik	13	23278350 to 23282267	3917	+	lincRNA gene	RIKEN cDNA 4933404K08 gene
Gm40832	13	23284323 to 23286746	2423	-	lncRNA gene	predicted gene, 40832
n-TVaac4	13	23285401 to 23285473	72	+	tRNA gene	nuclear encoded tRNA valine 4 (anticodon AAC)
n-TAagc10	13	23285649 to 23285721	72	+	tRNA gene	nuclear encoded tRNA alanine 10 (anticodon AGC)
Cpgi5345	13	23286161 to 23286596	435		CpG island	CpG island 5345
Gm11333	13	23298049 to 23298196	147	+	pseudogene	predicted gene 11333
n-TVaac6	13	23298781 to 23298853	72	+	tRNA gene	nuclear encoded tRNA valine 6 (anticodon AAC)
n-TAagc11	13	23299061 to 23299133	72	+	tRNA gene	nuclear encoded tRNA alanine 11 (anticodon AGC)
n-TVcac4	13	23300122 to 23300194	72	+	tRNA gene	nuclear encoded tRNA valine 4 (anticodon CAC)