Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:22038883-22290723

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5341 13 22040909 to 22041468 559 CpG island CpG island 5341
Hist1h4i 13 22040960 to 22041362 402 - protein coding gene histone cluster 1, H4i
Tssr121689 13 22041357 to 22041363 6 - TSS region transcription start site region 121689
Hist1h2ag 13 22042478 to 22042949 471 - protein coding gene histone cluster 1, H2ag
Gm44486 13 22042545 to 22042682 137 + miRNA gene predicted gene, 44486
Cpgi5342 13 22042908 to 22043247 339 CpG island CpG island 5342
Tssr121690 13 22042951 to 22042978 27 - TSS region transcription start site region 121690
Tssr118818 13 22043189 to 22043208 19 + TSS region transcription start site region 118818
Hist1h2bj 13 22043230 to 22043658 428 + protein coding gene histone cluster 1, H2bj
Gm48356 13 22049514 to 22051450 1936 + unclassified gene predicted gene, 48356
Tssr118819 13 22049834 to 22049858 24 + TSS region transcription start site region 118819
Cpgi5343 13 22050656 to 22051331 675 CpG island CpG island 5343
n-TSgct5 13 22050686 to 22050767 81 - tRNA gene nuclear encoded tRNA serine 5 (anticodon GCT)
Vmn1r-ps92 13 22057346 to 22057862 516 - pseudogene vomeronasal 1 receptor, pseudogene 92
Vmn1r-ps93 13 22078253 to 22078684 431 + pseudogene vomeronasal 1 receptor, pseudogene 93
Gm11285 13 22083466 to 22083787 321 - pseudogene predicted gene 11285
Gm26300 13 22083541 to 22083634 93 - miRNA gene predicted gene, 26300
Vmn1r188 13 22087878 to 22088804 926 + protein coding gene vomeronasal 1 receptor 188
Vmn1r-ps94 13 22092154 to 22092589 435 + pseudogene vomeronasal 1 receptor, pseudogene 94
Vmn1r189 13 22101727 to 22102665 938 - protein coding gene vomeronasal 1 receptor 189
Vmn1r-ps95 13 22123295 to 22124193 898 + pseudogene vomeronasal 1 receptor, pseudogene 95
Vmn1r-ps96 13 22126770 to 22127037 267 + pseudogene vomeronasal 1 receptor, pseudogene 96
Vmn1r-ps97 13 22136424 to 22137025 601 - pseudogene vomeronasal 1 receptor, pseudogene 97
Vmn1r190-ps 13 22144441 to 22145343 902 - pseudogene vomeronasal 1 receptor 190, pseudogene
Vmn1r-ps98 13 22152362 to 22152727 365 + pseudogene vomeronasal 1 receptor, pseudogene 98
Gm11284 13 22163883 to 22165723 1840 - pseudogene predicted gene 11284
Vmn1r-ps99 13 22174829 to 22175594 765 - pseudogene vomeronasal 1 receptor, pseudogene 97
Vmn1r191 13 22178686 to 22179582 896 - protein coding gene vomeronasal 1 receptor 191
Vmn1r192 13 22187146 to 22188048 902 - protein coding gene vomeronasal 1 receptor 192
Gm25084 13 22204575 to 22204675 100 - miRNA gene predicted gene, 25084
Gm23282 13 22212419 to 22212519 100 - miRNA gene predicted gene, 23282
Vmn1r193 13 22218861 to 22219820 959 - protein coding gene vomeronasal 1 receptor 193
Vmn1r194 13 22244215 to 22245105 890 + protein coding gene vomeronasal 1 receptor 194
Vmn1r195 13 22278317 to 22279404 1087 + protein coding gene vomeronasal 1 receptor 195
Gm11295 13 22282354 to 22283548 1194 + pseudogene predicted gene 11295