Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:21312820-21422289

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gpx6 13 21312125 to 21319624 7499 + protein coding gene glutathione peroxidase 6
Tssr118775 13 21317208 to 21317247 39 + TSS region transcription start site region 118775
Tssr118776 13 21317254 to 21317261 7 + TSS region transcription start site region 118776
n-TTcgt4 13 21322813 to 21322886 73 + tRNA gene nuclear encoded tRNA threonine 4 (anticodon CGT)
n-TMcat13 13 21326717 to 21326789 72 - tRNA gene nuclear encoded tRNA methionine 13 (anticodon CAT)
Cpgi5316 13 21326901 to 21327182 281 CpG island CpG island 5316
Olfr1367 13 21346930 to 21347880 950 + protein coding gene olfactory receptor 1367
Tssr118777 13 21356896 to 21356905 9 + TSS region transcription start site region 118777
Cpgi5317 13 21362744 to 21363043 299 CpG island CpG island 5317
Zscan12 13 21362820 to 21372289 9469 + protein coding gene zinc finger and SCAN domain containing 12
Tssr118778 13 21362826 to 21362883 57 + TSS region transcription start site region 118778
Tssr118779 13 21362897 to 21362922 25 + TSS region transcription start site region 118779
Tssr118780 13 21362929 to 21362937 8 + TSS region transcription start site region 118780
Gm11271 13 21380691 to 21381130 439 - pseudogene predicted gene 11271
Zkscan3 13 21387004 to 21402755 15751 - protein coding gene zinc finger with KRAB and SCAN domains 3
Mir6942 13 21396578 to 21396638 60 - miRNA gene microRNA 6942
Tssr121653 13 21401857 to 21401863 6 - TSS region transcription start site region 121653
Cpgi5318 13 21402445 to 21402815 370 CpG island CpG island 5318
Tssr121654 13 21402688 to 21402748 60 - TSS region transcription start site region 121654
Tssr118781 13 21416020 to 21416024 4 + TSS region transcription start site region 118781
Pgbd1 13 21421275 to 21441053 19778 - protein coding gene piggyBac transposable element derived 1