Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:20110115-20830120

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85 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Elmo1 13 20090596 to 20608353 517757 + protein coding gene engulfment and cell motility 1
Tssr118579 13 20111504 to 20111515 11 + TSS region transcription start site region 118579
Tssr118580 13 20184940 to 20184989 49 + TSS region transcription start site region 118580
Tssr118581 13 20184998 to 20185011 13 + TSS region transcription start site region 118581
Cpgi5309 13 20185250 to 20185516 266 CpG island CpG island 5309
Tssr118582 13 20185287 to 20185301 14 + TSS region transcription start site region 118582
Tssr118583 13 20185322 to 20185364 42 + TSS region transcription start site region 118583
Tssr118584 13 20185403 to 20185410 7 + TSS region transcription start site region 118584
Tssr118585 13 20185416 to 20185427 11 + TSS region transcription start site region 118585
Tssr118586 13 20204424 to 20204434 10 + TSS region transcription start site region 118586
Tssr121617 13 20228436 to 20228440 4 - TSS region transcription start site region 121617
Tssr118587 13 20240806 to 20240814 8 + TSS region transcription start site region 118587
D13Dcr5 13 20255418 to 20255513 95 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 5
Gm47665 13 20271905 to 20274039 2134 + unclassified gene predicted gene, 47665
D13Mit16 13 20293442 to 20293650 208 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 16
Bmd3 13 20293442 to 20293650 208 QTL bone mineral density 3
Sysbp2 13 20293442 to 59673791 39380349 QTL systolic blood pressure 2
Heal24 13 20293442 to 20293650 208 QTL wound healing/regeneration
Heal23 13 20293442 to 20293650 208 QTL wound healing/regeneration 23
Tssr118588 13 20352937 to 20352942 5 + TSS region transcription start site region 118588
Tssr118589 13 20406342 to 20406358 16 + TSS region transcription start site region 118589
D13Ertd212e 13 20417520 to 20417734 214 DNA segment DNA segment, Chr 13, ERATO Doi 212, expressed
Tssr118590 13 20429059 to 20429071 12 + TSS region transcription start site region 118590
Tssr118591 13 20429099 to 20429109 10 + TSS region transcription start site region 118591
D13Dcr1 13 20431332 to 20431458 126 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 1
Pregq3 13 20431342 to 72237070 51805728 QTL pregnancy QTL 3
Twq1 13 20431342 to 20431502 160 QTL testis weight QTL 1
D13Mit3 13 20431342 to 20431502 160 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 3
Tesq1 13 20431342 to 55572704 35141362 QTL testis weight QTL 1
Tssr118592 13 20445284 to 20445289 5 + TSS region transcription start site region 118592
Gm32036 13 20445286 to 20473490 28204 - antisense lncRNA gene predicted gene, 32036
Tssr118593 13 20470115 to 20470120 5 + TSS region transcription start site region 118593
Tssr118594 13 20472690 to 20472736 46 + TSS region transcription start site region 118594
Tssr118595 13 20473064 to 20473089 25 + TSS region transcription start site region 118595
Tssr118596 13 20473094 to 20473109 15 + TSS region transcription start site region 118596
Tssr118597 13 20477499 to 20477510 11 + TSS region transcription start site region 118597
Tssr118598 13 20477602 to 20477662 60 + TSS region transcription start site region 118598
Heal3 13 20496030 to 20496173 143 QTL wound healing/regeneration 3
D13Mit115 13 20496030 to 20496173 143 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 115
Gm47664 13 20499888 to 20501227 1339 + sense intronic lncRNA gene predicted gene, 47664
Gm47657 13 20504795 to 20506598 1803 + unclassified gene predicted gene, 47657
Tssr118599 13 20605394 to 20605414 20 + TSS region transcription start site region 118599
Tssr118600 13 20605437 to 20605461 24 + TSS region transcription start site region 118600
Gm47721 13 20645757 to 20647164 1407 + pseudogene predicted gene, 47721
Tssr4005 13 20660578 to 20660582 4 - TSS region transcription start site region 4005
Gm7611 13 20704383 to 20705382 999 - pseudogene predicted gene 7611
Tssr118601 13 20748347 to 20748348 1 + TSS region transcription start site region 118601
Gm7614 13 20748498 to 20748825 327 + pseudogene predicted gene 7614
Aoah 13 20794113 to 21036617 242504 + protein coding gene acyloxyacyl hydrolase
Tssr118602 13 20794128 to 20794179 51 + TSS region transcription start site region 118602
Tssr118603 13 20794187 to 20794204 17 + TSS region transcription start site region 118603
Tssr118604 13 20794212 to 20794223 11 + TSS region transcription start site region 118604
Tssr118605 13 20794298 to 20794307 9 + TSS region transcription start site region 118605
Tssr118606 13 20794312 to 20794364 52 + TSS region transcription start site region 118606
Tssr118607 13 20794445 to 20794452 7 + TSS region transcription start site region 118607
Tssr118608 13 20794920 to 20794942 22 + TSS region transcription start site region 118608
Tssr118609 13 20796389 to 20796391 2 + TSS region transcription start site region 118609
Tssr118610 13 20796418 to 20796467 49 + TSS region transcription start site region 118610
Tssr118611 13 20796509 to 20796526 17 + TSS region transcription start site region 118611
Tssr118612 13 20797670 to 20797684 14 + TSS region transcription start site region 118612
Tssr118613 13 20799092 to 20799104 12 + TSS region transcription start site region 118613
Tssr118614 13 20800038 to 20800064 26 + TSS region transcription start site region 118614
Tssr118615 13 20801165 to 20801177 12 + TSS region transcription start site region 118615
Tssr118616 13 20801612 to 20801620 8 + TSS region transcription start site region 118616
Tssr118617 13 20801880 to 20801912 32 + TSS region transcription start site region 118617
Tssr118618 13 20803113 to 20803132 19 + TSS region transcription start site region 118618
Tssr118619 13 20805170 to 20805180 10 + TSS region transcription start site region 118619
Tssr118620 13 20805181 to 20805190 9 + TSS region transcription start site region 118620
Tssr118621 13 20813928 to 20813934 6 + TSS region transcription start site region 118621
Tssr118622 13 20817785 to 20817821 36 + TSS region transcription start site region 118622
Tssr118623 13 20818333 to 20818354 21 + TSS region transcription start site region 118623
Tssr118624 13 20818819 to 20818845 26 + TSS region transcription start site region 118624
Tssr118625 13 20818868 to 20818877 9 + TSS region transcription start site region 118625
Tssr118626 13 20824145 to 20824175 30 + TSS region transcription start site region 118626
Tssr118627 13 20824684 to 20824726 42 + TSS region transcription start site region 118627
Tssr118628 13 20825270 to 20825274 4 + TSS region transcription start site region 118628
Tssr118629 13 20825832 to 20825848 16 + TSS region transcription start site region 118629
Tssr118630 13 20826126 to 20826144 18 + TSS region transcription start site region 118630
Tssr118631 13 20826484 to 20826501 17 + TSS region transcription start site region 118631
Tssr118632 13 20826508 to 20826520 12 + TSS region transcription start site region 118632
Tssr118633 13 20827664 to 20827700 36 + TSS region transcription start site region 118633
Gm47727 13 20827836 to 20828316 480 + pseudogene predicted gene, 47727
Tssr118634 13 20829354 to 20829367 13 + TSS region transcription start site region 118634
Tssr118635 13 20829534 to 20829555 21 + TSS region transcription start site region 118635
Mvwf4 13 112761890 to 20293442 -92468448 QTL modifier of von Willebrand factor 4