Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:20055284-20835289

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100 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5308 13 20090160 to 20091835 1675 CpG island CpG island 5308
Tssr118569 13 20090257 to 20090285 28 + TSS region transcription start site region 118569
Tssr118570 13 20090296 to 20090310 14 + TSS region transcription start site region 118570
Tssr118571 13 20090452 to 20090493 41 + TSS region transcription start site region 118571
Tssr118572 13 20090500 to 20090518 18 + TSS region transcription start site region 118572
Tssr118573 13 20090538 to 20090633 95 + TSS region transcription start site region 118573
Elmo1 13 20090596 to 20608353 517757 + protein coding gene engulfment and cell motility 1
Tssr118574 13 20090635 to 20090642 7 + TSS region transcription start site region 118574
Tssr118575 13 20090644 to 20090655 11 + TSS region transcription start site region 118575
Tssr118576 13 20090664 to 20090679 15 + TSS region transcription start site region 118576
Tssr121615 13 20091197 to 20091208 11 - TSS region transcription start site region 121615
Tssr121616 13 20091520 to 20091527 7 - TSS region transcription start site region 121616
Tssr118577 13 20096011 to 20096037 26 + TSS region transcription start site region 118577
Tssr118578 13 20098186 to 20098189 3 + TSS region transcription start site region 118578
Tssr118579 13 20111504 to 20111515 11 + TSS region transcription start site region 118579
Tssr118580 13 20184940 to 20184989 49 + TSS region transcription start site region 118580
Tssr118581 13 20184998 to 20185011 13 + TSS region transcription start site region 118581
Cpgi5309 13 20185250 to 20185516 266 CpG island CpG island 5309
Tssr118582 13 20185287 to 20185301 14 + TSS region transcription start site region 118582
Tssr118583 13 20185322 to 20185364 42 + TSS region transcription start site region 118583
Tssr118584 13 20185403 to 20185410 7 + TSS region transcription start site region 118584
Tssr118585 13 20185416 to 20185427 11 + TSS region transcription start site region 118585
Tssr118586 13 20204424 to 20204434 10 + TSS region transcription start site region 118586
Tssr121617 13 20228436 to 20228440 4 - TSS region transcription start site region 121617
Tssr118587 13 20240806 to 20240814 8 + TSS region transcription start site region 118587
D13Dcr5 13 20255418 to 20255513 95 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 5
Gm47665 13 20271905 to 20274039 2134 + unclassified gene predicted gene, 47665
Heal24 13 20293442 to 20293650 208 QTL wound healing/regeneration
Heal23 13 20293442 to 20293650 208 QTL wound healing/regeneration 23
Sysbp2 13 20293442 to 59673791 39380349 QTL systolic blood pressure 2
Bmd3 13 20293442 to 20293650 208 QTL bone mineral density 3
D13Mit16 13 20293442 to 20293650 208 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 16
Tssr118588 13 20352937 to 20352942 5 + TSS region transcription start site region 118588
Tssr118589 13 20406342 to 20406358 16 + TSS region transcription start site region 118589
D13Ertd212e 13 20417520 to 20417734 214 DNA segment DNA segment, Chr 13, ERATO Doi 212, expressed
Tssr118590 13 20429059 to 20429071 12 + TSS region transcription start site region 118590
Tssr118591 13 20429099 to 20429109 10 + TSS region transcription start site region 118591
D13Dcr1 13 20431332 to 20431458 126 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 1
D13Mit3 13 20431342 to 20431502 160 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 3
Twq1 13 20431342 to 20431502 160 QTL testis weight QTL 1
Tesq1 13 20431342 to 55572704 35141362 QTL testis weight QTL 1
Pregq3 13 20431342 to 72237070 51805728 QTL pregnancy QTL 3
Tssr118592 13 20445284 to 20445289 5 + TSS region transcription start site region 118592
Gm32036 13 20445286 to 20473490 28204 - antisense lncRNA gene predicted gene, 32036
Tssr118593 13 20470115 to 20470120 5 + TSS region transcription start site region 118593
Tssr118594 13 20472690 to 20472736 46 + TSS region transcription start site region 118594
Tssr118595 13 20473064 to 20473089 25 + TSS region transcription start site region 118595
Tssr118596 13 20473094 to 20473109 15 + TSS region transcription start site region 118596
Tssr118597 13 20477499 to 20477510 11 + TSS region transcription start site region 118597
Tssr118598 13 20477602 to 20477662 60 + TSS region transcription start site region 118598
Heal3 13 20496030 to 20496173 143 QTL wound healing/regeneration 3
D13Mit115 13 20496030 to 20496173 143 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 115
Gm47664 13 20499888 to 20501227 1339 + sense intronic lncRNA gene predicted gene, 47664
Gm47657 13 20504795 to 20506598 1803 + unclassified gene predicted gene, 47657
Tssr118599 13 20605394 to 20605414 20 + TSS region transcription start site region 118599
Tssr118600 13 20605437 to 20605461 24 + TSS region transcription start site region 118600
Gm47721 13 20645757 to 20647164 1407 + pseudogene predicted gene, 47721
Tssr4005 13 20660578 to 20660582 4 - TSS region transcription start site region 4005
Gm7611 13 20704383 to 20705382 999 - pseudogene predicted gene 7611
Tssr118601 13 20748347 to 20748348 1 + TSS region transcription start site region 118601
Gm7614 13 20748498 to 20748825 327 + pseudogene predicted gene 7614
Aoah 13 20794113 to 21036617 242504 + protein coding gene acyloxyacyl hydrolase
Tssr118602 13 20794128 to 20794179 51 + TSS region transcription start site region 118602
Tssr118603 13 20794187 to 20794204 17 + TSS region transcription start site region 118603
Tssr118604 13 20794212 to 20794223 11 + TSS region transcription start site region 118604
Tssr118605 13 20794298 to 20794307 9 + TSS region transcription start site region 118605
Tssr118606 13 20794312 to 20794364 52 + TSS region transcription start site region 118606
Tssr118607 13 20794445 to 20794452 7 + TSS region transcription start site region 118607
Tssr118608 13 20794920 to 20794942 22 + TSS region transcription start site region 118608
Tssr118609 13 20796389 to 20796391 2 + TSS region transcription start site region 118609
Tssr118610 13 20796418 to 20796467 49 + TSS region transcription start site region 118610
Tssr118611 13 20796509 to 20796526 17 + TSS region transcription start site region 118611
Tssr118612 13 20797670 to 20797684 14 + TSS region transcription start site region 118612
Tssr118613 13 20799092 to 20799104 12 + TSS region transcription start site region 118613
Tssr118614 13 20800038 to 20800064 26 + TSS region transcription start site region 118614
Tssr118615 13 20801165 to 20801177 12 + TSS region transcription start site region 118615
Tssr118616 13 20801612 to 20801620 8 + TSS region transcription start site region 118616
Tssr118617 13 20801880 to 20801912 32 + TSS region transcription start site region 118617
Tssr118618 13 20803113 to 20803132 19 + TSS region transcription start site region 118618
Tssr118619 13 20805170 to 20805180 10 + TSS region transcription start site region 118619
Tssr118620 13 20805181 to 20805190 9 + TSS region transcription start site region 118620
Tssr118621 13 20813928 to 20813934 6 + TSS region transcription start site region 118621
Tssr118622 13 20817785 to 20817821 36 + TSS region transcription start site region 118622
Tssr118623 13 20818333 to 20818354 21 + TSS region transcription start site region 118623
Tssr118624 13 20818819 to 20818845 26 + TSS region transcription start site region 118624
Tssr118625 13 20818868 to 20818877 9 + TSS region transcription start site region 118625
Tssr118626 13 20824145 to 20824175 30 + TSS region transcription start site region 118626
Tssr118627 13 20824684 to 20824726 42 + TSS region transcription start site region 118627
Tssr118628 13 20825270 to 20825274 4 + TSS region transcription start site region 118628
Tssr118629 13 20825832 to 20825848 16 + TSS region transcription start site region 118629
Tssr118630 13 20826126 to 20826144 18 + TSS region transcription start site region 118630
Tssr118631 13 20826484 to 20826501 17 + TSS region transcription start site region 118631
Tssr118632 13 20826508 to 20826520 12 + TSS region transcription start site region 118632
Tssr118633 13 20827664 to 20827700 36 + TSS region transcription start site region 118633
Gm47727 13 20827836 to 20828316 480 + pseudogene predicted gene, 47727
Tssr118634 13 20829354 to 20829367 13 + TSS region transcription start site region 118634
Tssr118635 13 20829534 to 20829555 21 + TSS region transcription start site region 118635
Tssr118636 13 20831105 to 20831116 11 + TSS region transcription start site region 118636
Tssr118637 13 20831124 to 20831134 10 + TSS region transcription start site region 118637
Mvwf4 13 112761890 to 20293442 -92468448 QTL modifier of von Willebrand factor 4