Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:117572312-118073323

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46438 13 117600271 to 117602333 2062 - lncRNA gene predicted gene, 46438
Tssr121230 13 117601827 to 117601832 5 + TSS region transcription start site region 121230
Cpgi6137 13 117602096 to 117603330 1234 CpG island CpG island 6137
Tssr121231 13 117602309 to 117602325 16 + TSS region transcription start site region 121231
Hcn1 13 117602320 to 117981028 378708 + protein coding gene hyperpolarization-activated, cyclic nucleotide-gated K+ 1
Tssr121232 13 117602331 to 117602338 7 + TSS region transcription start site region 121232
Tssr121233 13 117602439 to 117602482 43 + TSS region transcription start site region 121233
Tssr121234 13 117602502 to 117602513 11 + TSS region transcription start site region 121234
Fexq2 13 117604983 to 117604983 0 QTL fear expression QTL 2
Tssr121235 13 117666484 to 117666514 30 + TSS region transcription start site region 121235
4933413L06Rik 13 117706764 to 117720011 13247 - antisense lncRNA gene RIKEN cDNA 4933413L06 gene
Tssr121236 13 117709014 to 117709017 3 + TSS region transcription start site region 121236
Tssr121237 13 117724899 to 117724900 1 + TSS region transcription start site region 121237
Gm18989 13 117741095 to 117741819 724 - pseudogene predicted gene, 18989
C030014A21Rik 13 117822312 to 117823323 1011 unclassified gene RIKEN cDNA C030014A21 gene
Tssr4182 13 117909211 to 117909216 5 + TSS region transcription start site region 4182
Gm3474 13 117943664 to 117959078 15414 - lncRNA gene predicted gene 3474
Tssr121238 13 117947121 to 117947123 2 + TSS region transcription start site region 121238
Tssr121239 13 117971583 to 117971597 14 + TSS region transcription start site region 121239
6330563C09Rik 13 117985192 to 117987409 2217 unclassified non-coding RNA gene RIKEN cDNA 6330563C09 gene
Gm26349 13 118036614 to 118036743 129 + snoRNA gene predicted gene, 26349
Tssr121240 13 118047293 to 118047302 9 + TSS region transcription start site region 121240
Gm9633 13 118047320 to 118047944 624 + pseudogene predicted gene 9633