Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:115708024-116898484

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47892 13 115719304 to 115719499 195 - pseudogene predicted gene, 47892
Gm18135 13 115770936 to 115771453 517 + pseudogene predicted gene, 18135
Gm47893 13 116096035 to 116096300 265 + pseudogene predicted gene, 47893
Rpl34-ps2 13 116153781 to 116154134 353 + pseudogene ribosomal protein L34, pseudogene 2
Cpgi6129 13 116293895 to 116294226 331 CpG island CpG island 6129
Cpgi6130 13 116297136 to 116297635 499 CpG island CpG island 6130
Isl1 13 116298281 to 116309689 11408 - protein coding gene ISL1 transcription factor, LIM/homeodomain
Cpgi6131 13 116303024 to 116303484 460 CpG island CpG island 6131
Cpgi6132 13 116305094 to 116305515 421 CpG island CpG island 6132
Cpgi6133 13 116309331 to 116310451 1120 CpG island CpG island 6133
Tssr124163 13 116309639 to 116309699 60 - TSS region transcription start site region 124163
Tssr121211 13 116309823 to 116309841 18 + TSS region transcription start site region 121211
Gm29764 13 116330763 to 116331538 775 - pseudogene predicted gene, 29764
Gm47912 13 116361198 to 116361694 496 - pseudogene predicted gene, 47912
Mdq5 13 116444425 to 116444425 0 QTL mammary ductal QTL 5
Gm47914 13 116558311 to 116677705 119394 - lincRNA gene predicted gene, 47914
Gm47913 13 116651448 to 116663591 12143 - lincRNA gene predicted gene, 47913
Gm23198 13 116675878 to 116675968 90 + rRNA gene predicted gene, 23198
Cpgi6134 13 116705573 to 116706256 683 CpG island CpG island 6134
4930435F18Rik 13 116802095 to 116838178 36083 - lincRNA gene RIKEN cDNA 4930435F18 gene
A930041H05Rik 13 116850843 to 116852227 1384 unclassified gene RIKEN cDNA A930041H05 gene
Parp8 13 116854820 to 117025537 170717 - protein coding gene poly (ADP-ribose) polymerase family, member 8
Tssr124164 13 116876370 to 116876384 14 - TSS region transcription start site region 124164
Tssr124165 13 116888990 to 116889003 13 - TSS region transcription start site region 124165