Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:114831489-115101647

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itga2 13 114835912 to 114932041 96129 - protein coding gene integrin alpha 2
Tssr121207 13 114839285 to 114839296 11 + TSS region transcription start site region 121207
Tssr124139 13 114854119 to 114854126 7 - TSS region transcription start site region 124139
Tssr124140 13 114854133 to 114854145 12 - TSS region transcription start site region 124140
Tssr124141 13 114854444 to 114854449 5 - TSS region transcription start site region 124141
Cpgi6124 13 114896517 to 114896987 470 CpG island CpG island 6124
Gm34845 13 114922899 to 114927758 4859 + lncRNA gene predicted gene, 34845
Cpgi6125 13 114931722 to 114932354 632 CpG island CpG island 6125
Tssr124142 13 114931936 to 114931948 12 - TSS region transcription start site region 124142
Tssr124143 13 114932035 to 114932066 31 - TSS region transcription start site region 124143
Tssr124144 13 114932070 to 114932109 39 - TSS region transcription start site region 124144
Tssr121208 13 114932205 to 114932222 17 + TSS region transcription start site region 121208
Gm47776 13 114934642 to 114935068 426 - pseudogene predicted gene, 47776
6230424C14Rik 13 114953099 to 114955731 2632 unclassified gene RIKEN cDNA 6230424C14 gene
Itga1 13 114958079 to 115101964 143885 - protein coding gene integrin alpha 1
Cpgi6126 13 114966489 to 114966647 158 CpG island CpG island 6126
Gm49395 13 115035273 to 115101921 66648 - protein coding gene predicted gene, 49395
Tssr124145 13 115052729 to 115052736 7 - TSS region transcription start site region 124145
Tssr124146 13 115052741 to 115052755 14 - TSS region transcription start site region 124146
Tssr124147 13 115052757 to 115052770 13 - TSS region transcription start site region 124147
Tssr124148 13 115056521 to 115056525 4 - TSS region transcription start site region 124148
Pelo 13 115088355 to 115090158 1803 - protein coding gene pelota mRNA surveillance and ribosome rescue factor
Cpgi6127 13 115089384 to 115090721 1337 CpG island CpG island 6127
Tssr121209 13 115089466 to 115089486 20 + TSS region transcription start site region 121209
Tssr121210 13 115089492 to 115089516 24 + TSS region transcription start site region 121210
Gm10734 13 115089501 to 115090987 1486 + antisense lncRNA gene predicted gene 10734
Tssr124149 13 115090123 to 115090241 118 - TSS region transcription start site region 124149
Cpgi6128 13 115101400 to 115102172 772 CpG island CpG island 6128
Tssr124150 13 115101535 to 115101544 9 - TSS region transcription start site region 124150
Tssr124151 13 115101558 to 115101573 15 - TSS region transcription start site region 124151
Tssr124152 13 115101618 to 115101656 38 - TSS region transcription start site region 124152