Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:101999691-102699724

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41044 13 101998661 to 102014347 15686 - lncRNA gene predicted gene, 41044
Pbsq1 13 102000000 to 112000000 10000000 QTL percent broken sperm QTL 1
Tssr123850 13 102014314 to 102014331 17 - TSS region transcription start site region 123850
Tssr120871 13 102036207 to 102036214 7 + TSS region transcription start site region 120871
Gm38133 13 102114117 to 102116035 1918 - unclassified gene predicted gene, 38133
Gm25808 13 102228669 to 102228952 283 + unclassified non-coding RNA gene predicted gene, 25808
Tssr120872 13 102295285 to 102295292 7 + TSS region transcription start site region 120872
Cpgi6049 13 102295489 to 102295642 153 CpG island CpG island 6049
Gm46397 13 102342557 to 102351981 9424 - lncRNA gene predicted gene, 46397
Tssr120873 13 102349691 to 102349724 33 + TSS region transcription start site region 120873
Gm36703 13 102349730 to 102356684 6954 + lncRNA gene predicted gene, 36703
Gm47008 13 102366891 to 102367152 261 - pseudogene predicted gene, 47008
Tssr120874 13 102410818 to 102410821 3 + TSS region transcription start site region 120874
Gm36921 13 102452532 to 102454304 1772 + lncRNA gene predicted gene, 36921
Gm41045 13 102469333 to 102479674 10341 - lncRNA gene predicted gene, 41045
Gm29870 13 102482194 to 102483584 1390 - lncRNA gene predicted gene, 29870
Gm29927 13 102563187 to 102590285 27098 - lincRNA gene predicted gene, 29927
Gm47014 13 102604533 to 102606903 2370 + pseudogene predicted gene, 47014
Gm41046 13 102661408 to 102666459 5051 - lncRNA gene predicted gene, 41046
Cpgi6050 13 102666036 to 102666298 262 CpG island CpG island 6050
Tssr123851 13 102666454 to 102666467 13 - TSS region transcription start site region 123851
Tssr123852 13 102682606 to 102682642 36 - TSS region transcription start site region 123852
Tssr120875 13 102688394 to 102688429 35 + TSS region transcription start site region 120875
Tssr120876 13 102691965 to 102691971 6 + TSS region transcription start site region 120876
Tssr123853 13 102693375 to 102693381 6 - TSS region transcription start site region 123853
Tssr120877 13 102693522 to 102693586 64 + TSS region transcription start site region 120877
Cd180 13 102693558 to 102706631 13073 + protein coding gene CD180 antigen
Tssr120878 13 102693596 to 102693607 11 + TSS region transcription start site region 120878
Tssr120879 13 102693649 to 102693660 11 + TSS region transcription start site region 120879
Tssr120880 13 102698499 to 102698515 16 + TSS region transcription start site region 120880
D13Mit47 13 102699171 to 102699306 135 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 47