MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:101834117-102396035

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm19108	13	101841540 to 101842306	766	-	pseudogene	predicted gene, 19108
Tssr4155	13	101845589 to 101845594	5	+	TSS region	transcription start site region 4155
Gm47007	13	101855491 to 101856351	860	+	lincRNA gene	predicted gene, 47007
D13Mit70	13	101861669 to 101861832	163		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 70
D13Mit71	13	101904040 to 101904155	115		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 71
Gm17832	13	101920411 to 101921235	824	+	pseudogene	predicted gene, 17832
Gm41044	13	101998661 to 102014347	15686	-	lncRNA gene	predicted gene, 41044
Pbsq1	13	102000000 to 112000000	10000000		QTL	percent broken sperm QTL 1
Tssr123850	13	102014314 to 102014331	17	-	TSS region	transcription start site region 123850
Tssr120871	13	102036207 to 102036214	7	+	TSS region	transcription start site region 120871
Gm38133	13	102114117 to 102116035	1918	-	unclassified gene	predicted gene, 38133
Gm25808	13	102228669 to 102228952	283	+	unclassified non-coding RNA gene	predicted gene, 25808
Tssr120872	13	102295285 to 102295292	7	+	TSS region	transcription start site region 120872
Cpgi6049	13	102295489 to 102295642	153		CpG island	CpG island 6049
Gm46397	13	102342557 to 102351981	9424	-	lncRNA gene	predicted gene, 46397
Tssr120873	13	102349691 to 102349724	33	+	TSS region	transcription start site region 120873
Gm36703	13	102349730 to 102356684	6954	+	lncRNA gene	predicted gene, 36703
Gm47008	13	102366891 to 102367152	261	-	pseudogene	predicted gene, 47008