Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:100768602-101309246

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cenph 13 100759686 to 100775899 16213 - protein coding gene centromere protein H
Tssr120857 13 100770400 to 100770401 1 + TSS region transcription start site region 120857
Gm16335 13 100770464 to 100770772 308 + pseudogene predicted gene 16335
Cpgi6041 13 100775305 to 100776038 733 CpG island CpG island 6041
Tssr123809 13 100775803 to 100775843 40 - TSS region transcription start site region 123809
Tssr123810 13 100775844 to 100775893 49 - TSS region transcription start site region 123810
Ccnb1 13 100778739 to 100786486 7747 - protein coding gene cyclin B1
Tssr123811 13 100780178 to 100780182 4 - TSS region transcription start site region 123811
Cpgi6042 13 100786105 to 100786841 736 CpG island CpG island 6042
Tssr123812 13 100786538 to 100786556 18 - TSS region transcription start site region 123812
Tssr123813 13 100786600 to 100786612 12 - TSS region transcription start site region 123813
Slc30a5 13 100802648 to 100833427 30779 - protein coding gene solute carrier family 30 (zinc transporter), member 5
Cpgi6043 13 100832654 to 100833734 1080 CpG island CpG island 6043
Tssr123814 13 100833183 to 100833200 17 - TSS region transcription start site region 123814
Tssr123815 13 100833218 to 100833248 30 - TSS region transcription start site region 123815
Tssr123816 13 100833277 to 100833312 35 - TSS region transcription start site region 123816
Tssr123817 13 100833315 to 100833367 52 - TSS region transcription start site region 123817
Tssr123818 13 100833369 to 100833445 76 - TSS region transcription start site region 123818
Tssr123819 13 100833447 to 100833470 23 - TSS region transcription start site region 123819
Gm29502 13 100847433 to 100977915 130482 + lincRNA gene predicted gene 29502
Gm41040 13 100863402 to 100863851 449 - lncRNA gene predicted gene, 41040
Gm37830 13 100872780 to 100876195 3415 + unclassified gene predicted gene, 37830
Gm41041 13 100909097 to 100909889 792 - pseudogene predicted gene, 41041
Gm10257 13 100946405 to 100946815 410 - pseudogene predicted gene 10257
Tssr123820 13 100946928 to 100946930 2 - TSS region transcription start site region 123820
Gm41042 13 100997184 to 101080021 82837 + lncRNA gene predicted gene, 41042
Gm6114 13 101013019 to 101013986 967 - pseudogene predicted gene 6114
Hmgb1-ps9 13 101038602 to 101039246 644 - pseudogene high mobility group box 1, pseudogene 9
Tssr120858 13 101060471 to 101060479 8 + TSS region transcription start site region 120858
Cpgi6044 13 101210265 to 101210446 181 CpG island CpG island 6044
Gm36427 13 101226219 to 101306017 79798 - lncRNA gene predicted gene, 36427
5930438M14Rik 13 101232127 to 101247551 15424 + lincRNA gene RIKEN cDNA 5930438M14 gene
4933416M06Rik 13 101254319 to 101293396 39077 + lncRNA gene RIKEN cDNA 4933416M06 gene
4932411K12Rik 13 101301715 to 101464152 162437 + lincRNA gene RIKEN cDNA 4932411K12 gene