Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:100624588-100864663

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rad17 13 100617164 to 100651051 33887 - protein coding gene RAD17 checkpoint clamp loader component
Cpgi6036 13 100650609 to 100652016 1407 CpG island CpG island 6036
Tssr123802 13 100650981 to 100651085 104 - TSS region transcription start site region 123802
Tssr123803 13 100651253 to 100651264 11 - TSS region transcription start site region 123803
Tssr120846 13 100651307 to 100651310 3 + TSS region transcription start site region 120846
Tssr120847 13 100651328 to 100651397 69 + TSS region transcription start site region 120847
Ak6 13 100651343 to 100666415 15072 + protein coding gene adenylate kinase 6
Taf9 13 100651579 to 100656060 4481 + protein coding gene TATA-box binding protein associated factor 9
Tssr120848 13 100651590 to 100651601 11 + TSS region transcription start site region 120848
Tssr120849 13 100651610 to 100651631 21 + TSS region transcription start site region 120849
Tssr120850 13 100655282 to 100655313 31 + TSS region transcription start site region 120850
Cpgi6037 13 100669367 to 100670078 711 CpG island CpG island 6037
Tssr120851 13 100669698 to 100669754 56 + TSS region transcription start site region 120851
Ccdc125 13 100669717 to 100697240 27523 + protein coding gene coiled-coil domain containing 125
Tssr120852 13 100676103 to 100676136 33 + TSS region transcription start site region 120852
Tssr120853 13 100676140 to 100676150 10 + TSS region transcription start site region 120853
Tssr120854 13 100686195 to 100686199 4 + TSS region transcription start site region 120854
Cdk7 13 100702631 to 100730939 28308 - protein coding gene cyclin-dependent kinase 7
Tssr123804 13 100724544 to 100724547 3 - TSS region transcription start site region 123804
Tssr123805 13 100724880 to 100724883 3 - TSS region transcription start site region 123805
Cpgi6038 13 100730146 to 100730378 232 CpG island CpG island 6038
Cpgi6039 13 100730669 to 100731109 440 CpG island CpG island 6039
Tssr123806 13 100730839 to 100730962 123 - TSS region transcription start site region 123806
Tssr120855 13 100731013 to 100731077 64 + TSS region transcription start site region 120855
Mrps36 13 100735955 to 100744659 8704 - protein coding gene mitochondrial ribosomal protein S36
Pbwg17 13 100739552 to 100739748 196 QTL postnatal body weight growth 17
D13Mit195 13 100739552 to 100739748 196 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 195
Cpgi6040 13 100744069 to 100744769 700 CpG island CpG island 6040
Tssr123807 13 100744089 to 100744129 40 - TSS region transcription start site region 123807
Tssr120856 13 100744204 to 100744240 36 + TSS region transcription start site region 120856
Tssr123808 13 100744588 to 100744663 75 - TSS region transcription start site region 123808
Cenph 13 100759686 to 100775899 16213 - protein coding gene centromere protein H
D13Ertd37e 13 100763117 to 100763364 247 DNA segment DNA segment, Chr 13, ERATO Doi 37, expressed
Tssr120857 13 100770400 to 100770401 1 + TSS region transcription start site region 120857
Gm16335 13 100770464 to 100770772 308 + pseudogene predicted gene 16335
Cpgi6041 13 100775305 to 100776038 733 CpG island CpG island 6041
Tssr123809 13 100775803 to 100775843 40 - TSS region transcription start site region 123809
Tssr123810 13 100775844 to 100775893 49 - TSS region transcription start site region 123810
Ccnb1 13 100778739 to 100786486 7747 - protein coding gene cyclin B1
Tssr123811 13 100780178 to 100780182 4 - TSS region transcription start site region 123811
Cpgi6042 13 100786105 to 100786841 736 CpG island CpG island 6042
Tssr123812 13 100786538 to 100786556 18 - TSS region transcription start site region 123812
Tssr123813 13 100786600 to 100786612 12 - TSS region transcription start site region 123813
Slc30a5 13 100802648 to 100833427 30779 - protein coding gene solute carrier family 30 (zinc transporter), member 5
Cpgi6043 13 100832654 to 100833734 1080 CpG island CpG island 6043
Tssr123814 13 100833183 to 100833200 17 - TSS region transcription start site region 123814
Tssr123815 13 100833218 to 100833248 30 - TSS region transcription start site region 123815
Tssr123816 13 100833277 to 100833312 35 - TSS region transcription start site region 123816
Tssr123817 13 100833315 to 100833367 52 - TSS region transcription start site region 123817
Tssr123818 13 100833369 to 100833445 76 - TSS region transcription start site region 123818
Tssr123819 13 100833447 to 100833470 23 - TSS region transcription start site region 123819
Gm29502 13 100847433 to 100977915 130482 + lincRNA gene predicted gene 29502
Gm41040 13 100863402 to 100863851 449 - lncRNA gene predicted gene, 41040