Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:89574035-90764040

Filter by:
48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nrxn3 12 88722876 to 90334935 1612059 + protein coding gene neurexin III
Tssr114560 12 89591487 to 89591496 9 + TSS region transcription start site region 114560
Tssr114561 12 89601991 to 89601995 4 + TSS region transcription start site region 114561
Tssr3910 12 89635781 to 89635782 1 - TSS region transcription start site region 3910
Tssr114562 12 89642381 to 89642394 13 + TSS region transcription start site region 114562
Gm48692 12 89655723 to 89658101 2378 + unclassified gene predicted gene, 48692
Tssr114563 12 89765386 to 89765390 4 + TSS region transcription start site region 114563
Tssr114564 12 89772052 to 89772059 7 + TSS region transcription start site region 114564
Cpgi4950 12 89811875 to 89812713 838 CpG island CpG island 4950
Tssr114565 12 89812348 to 89812351 3 + TSS region transcription start site region 114565
Tssr114566 12 89812441 to 89812465 24 + TSS region transcription start site region 114566
Tssr114567 12 89812467 to 89812488 21 + TSS region transcription start site region 114567
Tssr114568 12 89812622 to 89812633 11 + TSS region transcription start site region 114568
Tssr114569 12 89812809 to 89812818 9 + TSS region transcription start site region 114569
Tssr114570 12 89812925 to 89812930 5 + TSS region transcription start site region 114570
Tssr114571 12 89813231 to 89813244 13 + TSS region transcription start site region 114571
Tssr114572 12 89813301 to 89813304 3 + TSS region transcription start site region 114572
Tssr114573 12 89813576 to 89813617 41 + TSS region transcription start site region 114573
Tssr114574 12 89834835 to 89834836 1 + TSS region transcription start site region 114574
Tssr3911 12 89852341 to 89852343 2 + TSS region transcription start site region 3911
Tssr114575 12 89870711 to 89870720 9 + TSS region transcription start site region 114575
D12Mit230 12 89994296 to 89994411 115 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 230
Gm48700 12 90068099 to 90072373 4274 + unclassified gene predicted gene, 48700
Tssr117186 12 90071028 to 90071029 1 - TSS region transcription start site region 117186
Tssr114576 12 90169035 to 90169040 5 + TSS region transcription start site region 114576
Tssr114577 12 90239263 to 90239267 4 + TSS region transcription start site region 114577
Gm2270 12 90364252 to 90367678 3426 + lincRNA gene predicted gene 2270
Gm47684 12 90393903 to 90398662 4759 - lincRNA gene predicted gene, 47684
Gm40538 12 90399667 to 90408824 9157 - lincRNA gene predicted gene, 40538
Tssr114578 12 90430462 to 90430472 10 + TSS region transcription start site region 114578
Gm47686 12 90491625 to 90492109 484 + pseudogene predicted gene, 47686
Gm2139 12 90587571 to 90588645 1074 - pseudogene predicted gene 2139
D12Mit275 12 90607794 to 90607913 119 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 275
Dio2 12 90724552 to 90738438 13886 - protein coding gene deiodinase, iodothyronine, type II
Tssr117187 12 90726909 to 90726915 6 - TSS region transcription start site region 117187
Tssr117188 12 90728111 to 90728133 22 - TSS region transcription start site region 117188
Tssr117189 12 90728198 to 90728223 25 - TSS region transcription start site region 117189
Tssr114579 12 90738092 to 90738096 4 + TSS region transcription start site region 114579
Cpgi4951 12 90738095 to 90738285 190 CpG island CpG island 4951
Tssr117190 12 90738095 to 90738157 62 - TSS region transcription start site region 117190
Gm26512 12 90738212 to 90812245 74033 + bidirectional promoter lncRNA gene predicted gene, 26512
Tssr114580 12 90738215 to 90738226 11 + TSS region transcription start site region 114580
Tssr117191 12 90738562 to 90738568 6 - TSS region transcription start site region 117191
Tssr114581 12 90738732 to 90738777 45 + TSS region transcription start site region 114581
Tssr114582 12 90738847 to 90738870 23 + TSS region transcription start site region 114582
Tssr117192 12 90738955 to 90738975 20 - TSS region transcription start site region 117192
Tssr117193 12 90739028 to 90739045 17 - TSS region transcription start site region 117193
4930544I03Rik 12 90753208 to 90969798 216590 - lincRNA gene RIKEN cDNA 4930544I03 gene