MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:8751040-8791062

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pum2	12	8674134 to 8752581	78447	+	protein coding gene	pumilio RNA-binding family member 2
Tssr115723	12	8762066 to 8762070	4	-	TSS region	transcription start site region 115723
Gm4755	12	8765788 to 8771253	5465	-	bidirectional promoter lncRNA gene	predicted gene 4755
Cpgi4399	12	8770893 to 8773183	2290		CpG island	CpG island 4399
Tssr112738	12	8771040 to 8771062	22	+	TSS region	transcription start site region 112738
Tssr112739	12	8771317 to 8771328	11	+	TSS region	transcription start site region 112739
Tssr112740	12	8771345 to 8771361	16	+	TSS region	transcription start site region 112740
Tssr112741	12	8771378 to 8771394	16	+	TSS region	transcription start site region 112741
Sdc1	12	8771396 to 8793716	22320	+	protein coding gene	syndecan 1
Tssr112742	12	8771405 to 8771425	20	+	TSS region	transcription start site region 112742
Tssr3790	12	8771430 to 8771444	14	+	TSS region	transcription start site region 3790
Tssr112743	12	8771448 to 8771464	16	+	TSS region	transcription start site region 112743
Tssr112744	12	8774569 to 8774573	4	+	TSS region	transcription start site region 112744
D12Mit104.1	12	8785895 to 8786025	130		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 104.1
D12Mit104	12	8786045 to 8786191	146		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 104
D12Mit104.2	12	8786129 to 8786295	166		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 104.2
Tssr112745	12	8790700 to 8790740	40	+	TSS region	transcription start site region 112745