Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:85288799-85389669

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4893 12 85288257 to 85288838 581 CpG island CpG island 4893
Zc2hc1c 12 85288591 to 85299358 10767 + protein coding gene zinc finger, C2HC-type containing 1C
Tssr114382 12 85289632 to 85289660 28 + TSS region transcription start site region 114382
Nek9 12 85299514 to 85339362 39848 - protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 9
Tssr117065 12 85331499 to 85331502 3 - TSS region transcription start site region 117065
Cpgi4894 12 85338799 to 85339669 870 CpG island CpG island 4894
Tssr117066 12 85339316 to 85339327 11 - TSS region transcription start site region 117066
Tssr117067 12 85339346 to 85339391 45 - TSS region transcription start site region 117067
Tssr114383 12 85339430 to 85339448 18 + TSS region transcription start site region 114383
Tssr117068 12 85339498 to 85339532 34 - TSS region transcription start site region 117068
Tssr114384 12 85339696 to 85339701 5 + TSS region transcription start site region 114384
Tmed10 12 85340614 to 85374717 34103 - protein coding gene transmembrane p24 trafficking protein 10
Tssr117069 12 85341573 to 85341586 13 - TSS region transcription start site region 117069
Tssr117070 12 85341607 to 85341620 13 - TSS region transcription start site region 117070
Tssr117071 12 85344452 to 85344458 6 - TSS region transcription start site region 117071
Tssr117072 12 85344467 to 85344495 28 - TSS region transcription start site region 117072
Tssr117073 12 85350553 to 85350554 1 - TSS region transcription start site region 117073
Tssr117074 12 85350580 to 85350585 5 - TSS region transcription start site region 117074
Tssr117075 12 85350625 to 85350630 5 - TSS region transcription start site region 117075
Tssr114385 12 85351039 to 85351062 23 + TSS region transcription start site region 114385
Tssr117076 12 85351125 to 85351157 32 - TSS region transcription start site region 117076
Gm47820 12 85356584 to 85357177 593 + pseudogene predicted gene, 47820
Gm47817 12 85360493 to 85363645 3152 - unclassified gene predicted gene, 47817
Tssr117077 12 85373459 to 85373470 11 - TSS region transcription start site region 117077
Tssr117078 12 85373910 to 85373936 26 - TSS region transcription start site region 117078
Cpgi4895 12 85373975 to 85374882 907 CpG island CpG island 4895
Tssr114386 12 85374094 to 85374124 30 + TSS region transcription start site region 114386
Gm47819 12 85374117 to 85376632 2515 + antisense lncRNA gene predicted gene, 47819
Tssr114387 12 85374125 to 85374136 11 + TSS region transcription start site region 114387
Tssr3891 12 85374179 to 85374212 33 - TSS region transcription start site region 3891
Tssr114388 12 85374279 to 85374304 25 + TSS region transcription start site region 114388
Tssr117079 12 85374696 to 85374719 23 - TSS region transcription start site region 117079
Tssr114389 12 85385993 to 85386032 39 + TSS region transcription start site region 114389
Tssr114390 12 85389421 to 85389435 14 + TSS region transcription start site region 114390
Tssr114391 12 85389451 to 85389459 8 + TSS region transcription start site region 114391