Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:85217398-85335447

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4890 12 85219040 to 85220140 1100 CpG island CpG island 4890
Tssr114380 12 85219475 to 85219546 71 + TSS region transcription start site region 114380
Eif2b2 12 85219481 to 85226628 7147 + protein coding gene eukaryotic translation initiation factor 2B, subunit 2 beta
Mlh3 12 85234520 to 85270599 36079 - protein coding gene mutL homolog 3
Mir6938 12 85245923 to 85245985 62 - miRNA gene microRNA 6938
Gm46369 12 85255527 to 85255927 400 + pseudogene predicted gene, 46369
Cpgi4891 12 85270305 to 85270814 509 CpG island CpG island 4891
Tssr117060 12 85270585 to 85270608 23 - TSS region transcription start site region 117060
Tssr117061 12 85270612 to 85270643 31 - TSS region transcription start site region 117061
Acyp1 12 85272398 to 85280447 8049 - protein coding gene acylphosphatase 1, erythrocyte (common) type
Cpgi4892 12 85279756 to 85280548 792 CpG island CpG island 4892
Tssr117062 12 85280342 to 85280347 5 - TSS region transcription start site region 117062
Tssr117063 12 85280361 to 85280435 74 - TSS region transcription start site region 117063
Tssr3890 12 85281340 to 85281344 4 + TSS region transcription start site region 3890
Cpgi4893 12 85288257 to 85288838 581 CpG island CpG island 4893
Tssr117064 12 85288419 to 85288427 8 - TSS region transcription start site region 117064
Zc2hc1c 12 85288591 to 85299358 10767 + protein coding gene zinc finger, C2HC-type containing 1C
Tssr114381 12 85288670 to 85288712 42 + TSS region transcription start site region 114381
Tssr114382 12 85289632 to 85289660 28 + TSS region transcription start site region 114382
Nek9 12 85299514 to 85339362 39848 - protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 9
Tssr117065 12 85331499 to 85331502 3 - TSS region transcription start site region 117065