MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:84552531-84667483

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr117015	12	84553035 to 84553084	49	-	TSS region	transcription start site region 117015
Tssr114350	12	84569821 to 84569835	14	+	TSS region	transcription start site region 114350
Vsx2	12	84569828 to 84595457	25629	+	protein coding gene	visual system homeobox 2
Cpgi4872	12	84569906 to 84570490	584		CpG island	CpG island 4872
Cpgi4873	12	84570681 to 84572183	1502		CpG island	CpG island 4873
Tssr114351	12	84571502 to 84571545	43	+	TSS region	transcription start site region 114351
Tssr117016	12	84583145 to 84583153	8	-	TSS region	transcription start site region 117016
Cpgi4874	12	84589893 to 84590464	571		CpG island	CpG island 4874
Abcd4	12	84602531 to 84617483	14952	-	protein coding gene	ATP-binding cassette, sub-family D (ALD), member 4
Cpgi4875	12	84613825 to 84614223	398		CpG island	CpG island 4875
Cpgi4876	12	84617105 to 84617583	478		CpG island	CpG island 4876
Tssr117017	12	84617326 to 84617419	93	-	TSS region	transcription start site region 117017
Tssr114352	12	84640930 to 84640942	12	+	TSS region	transcription start site region 114352
Tssr114353	12	84640947 to 84640995	48	+	TSS region	transcription start site region 114353
Vrtn	12	84641019 to 84651455	10436	+	protein coding gene	vertebrae development associated
Tssr114354	12	84641394 to 84641409	15	+	TSS region	transcription start site region 114354
Cpgi4877	12	84648418 to 84648623	205		CpG island	CpG island 4877
Cpgi4878	12	84649091 to 84649457	366		CpG island	CpG island 4878
Cpgi4879	12	84650055 to 84650262	207		CpG island	CpG island 4879