MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:80533011-80647140

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16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Galnt16	12	80518277 to 80603896	85619	+	protein coding gene	polypeptide N-acetylgalactosaminyltransferase 16
4933406B15Rik	12	80583011 to 80597140	14129	-	antisense lncRNA gene	RIKEN cDNA 4933406B15 gene
D12Mit149	12	80588172 to 80588302	130		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 149
Tssr116889	12	80597124 to 80597139	15	-	TSS region	transcription start site region 116889
Gm46364	12	80613296 to 80613614	318	+	pseudogene	predicted gene, 46364
Gm23817	12	80622830 to 80622933	103	-	snRNA gene	predicted gene, 23817
Gm47852	12	80629294 to 80629558	264	-	pseudogene	predicted gene, 47852
Erh	12	80634023 to 80643871	9848	-	protein coding gene	ERH mRNA splicing and mitosis factor
Gm47879	12	80635992 to 80637371	1379	+	antisense lncRNA gene	predicted gene, 47879
Cpgi4817	12	80643262 to 80644813	1551		CpG island	CpG island 4817
Tssr116890	12	80643799 to 80643857	58	-	TSS region	transcription start site region 116890
Tssr116891	12	80643858 to 80643869	11	-	TSS region	transcription start site region 116891
Slc39a9	12	80644163 to 80683342	39179	+	protein coding gene	solute carrier family 39 (zinc transporter), member 9
Tssr114148	12	80644212 to 80644265	53	+	TSS region	transcription start site region 114148
Tssr114149	12	80644470 to 80644496	26	+	TSS region	transcription start site region 114149
Tssr114150	12	80644502 to 80644525	23	+	TSS region	transcription start site region 114150