MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:80405209-80465936

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dcaf5	12	80335848 to 80436601	100753	-	protein coding gene	DDB1 and CUL4 associated factor 5
Cpgi4814	12	80434719 to 80437122	2403		CpG island	CpG island 4814
Tssr114137	12	80435083 to 80435146	63	+	TSS region	transcription start site region 114137
Tssr114138	12	80435171 to 80435235	64	+	TSS region	transcription start site region 114138
Gm30025	12	80435209 to 80435936	727	+	antisense lncRNA gene	predicted gene, 30025
Tssr116883	12	80436407 to 80436456	49	-	TSS region	transcription start site region 116883
Tssr116884	12	80436541 to 80436566	25	-	TSS region	transcription start site region 116884
Tssr116885	12	80436571 to 80436603	32	-	TSS region	transcription start site region 116885
Tssr116886	12	80436792 to 80436825	33	-	TSS region	transcription start site region 116886
Tssr116887	12	80441487 to 80441518	31	-	TSS region	transcription start site region 116887
Tssr116888	12	80441545 to 80441546	1	-	TSS region	transcription start site region 116888
Gm46363	12	80450478 to 80459126	8648	-	lncRNA gene	predicted gene, 46363
Gm30076	12	80459164 to 80463219	4055	-	lncRNA gene	predicted gene, 30076
Cpgi4815	12	80463087 to 80463730	643		CpG island	CpG island 4815
Exd2	12	80463095 to 80498135	35040	+	protein coding gene	exonuclease 3'-5' domain containing 2
Tssr114139	12	80463165 to 80463179	14	+	TSS region	transcription start site region 114139
Tssr114140	12	80463182 to 80463200	18	+	TSS region	transcription start site region 114140
Tssr114141	12	80463204 to 80463257	53	+	TSS region	transcription start site region 114141