Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:80113163-80223675

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr116856 12 80113230 to 80113232 2 - TSS region transcription start site region 116856
Tssr114127 12 80113394 to 80113405 11 + TSS region transcription start site region 114127
Cpgi4808 12 80113782 to 80114772 990 CpG island CpG island 4808
Tssr116857 12 80114471 to 80114486 15 - TSS region transcription start site region 116857
Tssr116858 12 80114519 to 80114536 17 - TSS region transcription start site region 116858
Cpgi4809 12 80115033 to 80116327 1294 CpG island CpG island 4809
Tssr114128 12 80115131 to 80115178 47 + TSS region transcription start site region 114128
Tssr116859 12 80115203 to 80115225 22 - TSS region transcription start site region 116859
Tssr116860 12 80115294 to 80115307 13 - TSS region transcription start site region 116860
Tssr116861 12 80115480 to 80115494 14 - TSS region transcription start site region 116861
Tssr116862 12 80115695 to 80115711 16 - TSS region transcription start site region 116862
Tssr114129 12 80115849 to 80115936 87 + TSS region transcription start site region 114129
1300014J16Rik 12 80115863 to 80117199 1336 + lincRNA gene RIKEN cDNA 1300014J16 gene
Tssr116863 12 80116919 to 80116941 22 - TSS region transcription start site region 116863
2310015A10Rik 12 80120546 to 80132844 12298 - lncRNA gene RIKEN cDNA 2310015A10 gene
Tssr116864 12 80128459 to 80128466 7 - TSS region transcription start site region 116864
Tssr114130 12 80130891 to 80130909 18 + TSS region transcription start site region 114130
Cpgi4810 12 80132105 to 80133106 1001 CpG island CpG island 4810
Tssr116865 12 80132274 to 80132278 4 - TSS region transcription start site region 116865
Tssr116866 12 80132802 to 80132821 19 - TSS region transcription start site region 116866
Tssr116867 12 80135743 to 80135750 7 - TSS region transcription start site region 116867
Tssr116868 12 80139268 to 80139270 2 - TSS region transcription start site region 116868
Tssr116869 12 80139336 to 80139341 5 - TSS region transcription start site region 116869
Cpgi4811 12 80161768 to 80162010 242 CpG island CpG island 4811
Actn1 12 80167547 to 80260371 92824 - protein coding gene actinin, alpha 1
Tssr116870 12 80167818 to 80167837 19 - TSS region transcription start site region 116870
Tssr116871 12 80168159 to 80168179 20 - TSS region transcription start site region 116871
Cpgi4812 12 80168163 to 80168675 512 CpG island CpG island 4812
Tssr116872 12 80168183 to 80168197 14 - TSS region transcription start site region 116872
Tssr114131 12 80168288 to 80168331 43 + TSS region transcription start site region 114131
Tssr114132 12 80168938 to 80168977 39 + TSS region transcription start site region 114132
Tssr116873 12 80168939 to 80168969 30 - TSS region transcription start site region 116873
Tssr114133 12 80174453 to 80174480 27 + TSS region transcription start site region 114133
Tssr116874 12 80181972 to 80181977 5 - TSS region transcription start site region 116874
Gm47765 12 80190160 to 80191428 1268 - unclassified non-coding RNA gene predicted gene, 47765
Strm 12 80190582 to 80194442 3860 unclassified gene striamin
Gm47767 12 80209243 to 80211916 2673 + antisense lncRNA gene predicted gene, 47767
Tssr114134 12 80210188 to 80210197 9 + TSS region transcription start site region 114134
Tssr114135 12 80211141 to 80211148 7 + TSS region transcription start site region 114135