Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:76782207-77022231

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmc1m3 12 5368440 to 76984429 71615989 QTL Tmc1 modifier 3
Churc1 12 76765573 to 76783180 17607 + protein coding gene churchill domain containing 1
Tssr113989 12 76782272 to 76782276 4 + TSS region transcription start site region 113989
Gpx2 12 76792335 to 76795554 3219 - protein coding gene glutathione peroxidase 2
Tssr113990 12 76792761 to 76792788 27 + TSS region transcription start site region 113990
Tssr116751 12 76795316 to 76795355 39 - TSS region transcription start site region 116751
Tssr116752 12 76795425 to 76795464 39 - TSS region transcription start site region 116752
Tssr116753 12 76795471 to 76795478 7 - TSS region transcription start site region 116753
Tssr116754 12 76795489 to 76795521 32 - TSS region transcription start site region 116754
Tssr3866 12 76795549 to 76795552 3 - TSS region transcription start site region 3866
Rab15 12 76797960 to 76822763 24803 - protein coding gene RAB15, member RAS oncogene family
Gm34988 12 76818317 to 76818794 477 + lncRNA gene predicted gene, 34988
Tssr116755 12 76818389 to 76818395 6 - TSS region transcription start site region 116755
Cpgi4787 12 76821926 to 76823078 1152 CpG island CpG island 4787
Tssr116756 12 76822386 to 76822414 28 - TSS region transcription start site region 116756
Tssr116757 12 76822420 to 76822431 11 - TSS region transcription start site region 116757
Tssr116758 12 76822465 to 76822508 43 - TSS region transcription start site region 116758
Tssr116759 12 76822510 to 76822558 48 - TSS region transcription start site region 116759
Tssr116760 12 76822736 to 76822757 21 - TSS region transcription start site region 116760
Cpgi4788 12 76837208 to 76838092 884 CpG island CpG island 4788
Fntb 12 76837391 to 76921412 84021 + protein coding gene farnesyltransferase, CAAX box, beta
Tssr113991 12 76837408 to 76837466 58 + TSS region transcription start site region 113991
Tssr113992 12 76837469 to 76837480 11 + TSS region transcription start site region 113992
Gm46357 12 76858709 to 76869172 10463 - lncRNA gene predicted gene, 46357
Tssr113993 12 76887045 to 76887083 38 + TSS region transcription start site region 113993
Gm46358 12 76896781 to 76910279 13498 - lncRNA gene predicted gene, 46358
Tssr113994 12 76896813 to 76896814 1 + TSS region transcription start site region 113994
Tssr113995 12 76902144 to 76902155 11 + TSS region transcription start site region 113995
Tssr113996 12 76902170 to 76902182 12 + TSS region transcription start site region 113996
Tssr113997 12 76902187 to 76902201 14 + TSS region transcription start site region 113997
Tssr113998 12 76902207 to 76902231 24 + TSS region transcription start site region 113998
Tssr113999 12 76909442 to 76909456 14 + TSS region transcription start site region 113999
Tssr114000 12 76909483 to 76909496 13 + TSS region transcription start site region 114000
Tssr114001 12 76909501 to 76909511 10 + TSS region transcription start site region 114001
Tssr3867 12 76909514 to 76909519 5 + TSS region transcription start site region 3867
Tssr3868 12 76910381 to 76910393 12 - TSS region transcription start site region 3868
Tssr116761 12 76910462 to 76910499 37 - TSS region transcription start site region 116761
Tssr114002 12 76914636 to 76914655 19 + TSS region transcription start site region 114002
Tssr114003 12 76916417 to 76916442 25 + TSS region transcription start site region 114003
Tssr114004 12 76920744 to 76920757 13 + TSS region transcription start site region 114004
Max 12 76937269 to 76962201 24932 - protein coding gene Max protein
Tssr116762 12 76937813 to 76937863 50 - TSS region transcription start site region 116762
Tssr114005 12 76938659 to 76938682 23 + TSS region transcription start site region 114005
Tssr116763 12 76940072 to 76940100 28 - TSS region transcription start site region 116763
Gm47218 12 76940475 to 76941793 1318 - unclassified gene predicted gene, 47218
Cpgi4789 12 76961371 to 76962859 1488 CpG island CpG island 4789
Tssr116764 12 76961445 to 76961467 22 - TSS region transcription start site region 116764
Tssr116765 12 76962045 to 76962056 11 - TSS region transcription start site region 116765
Tssr116766 12 76962070 to 76962083 13 - TSS region transcription start site region 116766
Tssr116767 12 76962104 to 76962111 7 - TSS region transcription start site region 116767
Tssr116768 12 76962159 to 76962172 13 - TSS region transcription start site region 116768
Tssr116769 12 76962178 to 76962240 62 - TSS region transcription start site region 116769
Tssr114006 12 76966117 to 76966125 8 + TSS region transcription start site region 114006
Gm35041 12 76972485 to 77022040 49555 + lincRNA gene predicted gene, 35041
Tssr116770 12 76982823 to 76982826 3 - TSS region transcription start site region 116770
D12Mit52 12 76984294 to 76984429 135 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 52
Tssr114007 12 77001483 to 77001488 5 + TSS region transcription start site region 114007