Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:73352142-73556907

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc38a6 12 73286779 to 73354049 67270 + protein coding gene solute carrier family 38, member 6
Tssr113793 12 73352453 to 73352467 14 + TSS region transcription start site region 113793
Tssr113794 12 73353143 to 73353149 6 + TSS region transcription start site region 113794
Gm48653 12 73355081 to 73361997 6916 + lincRNA gene predicted gene, 48653
D830013O20Rik 12 73364075 to 73409557 45482 - lincRNA gene RIKEN cDNA D830013O20 gene
Gm40442 12 73402746 to 73406461 3715 + lncRNA gene predicted gene, 40442
Tssr116652 12 73409543 to 73409588 45 - TSS region transcription start site region 116652
Tssr116653 12 73409691 to 73409719 28 - TSS region transcription start site region 116653
Tssr116654 12 73444868 to 73444884 16 - TSS region transcription start site region 116654
Tssr116655 12 73444921 to 73444938 17 - TSS region transcription start site region 116655
Tssr113795 12 73445104 to 73445128 24 + TSS region transcription start site region 113795
Gm33929 12 73448318 to 73449215 897 + lincRNA gene predicted gene, 33929
Gm34080 12 73450833 to 73503163 52330 + lncRNA gene predicted gene, 34080
Gm48656 12 73452142 to 73456907 4765 - lincRNA gene predicted gene, 48656
Gm34016 12 73489915 to 73508670 18755 - lincRNA gene predicted gene, 34016
Tssr116656 12 73508666 to 73508695 29 - TSS region transcription start site region 116656
Tssr113796 12 73525993 to 73525994 1 + TSS region transcription start site region 113796
Cpgi4756 12 73529924 to 73530087 163 CpG island CpG island 4756
Tmem30b 12 73543402 to 73546392 2990 - protein coding gene transmembrane protein 30B
Cpgi4757 12 73545114 to 73546814 1700 CpG island CpG island 4757
Tssr116657 12 73546344 to 73546358 14 - TSS region transcription start site region 116657
Tssr116658 12 73546375 to 73546380 5 - TSS region transcription start site region 116658
Tssr116659 12 73546383 to 73546411 28 - TSS region transcription start site region 116659
Tssr116660 12 73546421 to 73546449 28 - TSS region transcription start site region 116660
Tssr113797 12 73548476 to 73548481 5 + TSS region transcription start site region 113797
2210039B01Rik 12 73548483 to 73551986 3503 + lincRNA gene RIKEN cDNA 2210039B01 gene