Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:72295853-72655967

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rtn1 12 72211752 to 72409054 197302 - protein coding gene reticulon 1
Cpgi4730 12 72303776 to 72304232 456 CpG island CpG island 4730
Tssr116607 12 72374324 to 72374348 24 - TSS region transcription start site region 116607
Tssr116608 12 72375087 to 72375097 10 - TSS region transcription start site region 116608
Tssr116609 12 72375128 to 72375138 10 - TSS region transcription start site region 116609
Cpgi4731 12 72407801 to 72408961 1160 CpG island CpG island 4731
Tssr116610 12 72408291 to 72408323 32 - TSS region transcription start site region 116610
Tssr116611 12 72408326 to 72408338 12 - TSS region transcription start site region 116611
Tssr113743 12 72408377 to 72408387 10 + TSS region transcription start site region 113743
Tssr116612 12 72408578 to 72408583 5 - TSS region transcription start site region 116612
Tssr116613 12 72408662 to 72408673 11 - TSS region transcription start site region 116613
Tssr116614 12 72408688 to 72408740 52 - TSS region transcription start site region 116614
Tssr116615 12 72408741 to 72408759 18 - TSS region transcription start site region 116615
Tssr116616 12 72408846 to 72408851 5 - TSS region transcription start site region 116616
Tssr116617 12 72408934 to 72408945 11 - TSS region transcription start site region 116617
Gm33487 12 72424648 to 72432318 7670 - lncRNA gene predicted gene, 33487
Lrrc9 12 72433942 to 72517989 84047 + protein coding gene leucine rich repeat containing 9
Tssr113744 12 72434641 to 72434651 10 + TSS region transcription start site region 113744
Tssr113745 12 72434659 to 72434705 46 + TSS region transcription start site region 113745
Cpgi4732 12 72441830 to 72441985 155 CpG island CpG island 4732
Tssr113746 12 72441852 to 72441864 12 + TSS region transcription start site region 113746
Tssr113747 12 72441871 to 72441896 25 + TSS region transcription start site region 113747
Tssr113748 12 72441950 to 72441970 20 + TSS region transcription start site region 113748
Tssr113749 12 72441982 to 72441992 10 + TSS region transcription start site region 113749
Tssr113750 12 72442352 to 72442367 15 + TSS region transcription start site region 113750
D12Mit155 12 72472204 to 72472342 138 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 155
Gm44392 12 72475853 to 72475967 114 - miRNA gene predicted gene, 44392
Tssr116618 12 72490086 to 72490091 5 - TSS region transcription start site region 116618
Cpgi4733 12 72535990 to 72536655 665 CpG island CpG island 4733
Tssr113751 12 72536342 to 72536396 54 + TSS region transcription start site region 113751
Pcnx4 12 72536383 to 72580119 43736 + protein coding gene pecanex homolog 4
Gm4756 12 72620119 to 72629021 8902 - protein coding gene predicted gene 4756
Tssr113752 12 72620673 to 72620716 43 + TSS region transcription start site region 113752
Ly6e-ps1 12 72620775 to 72621141 366 + pseudogene lymphocyte antigen 6 complex, locus E, pseudogene 1
Tssr116619 12 72628833 to 72628840 7 - TSS region transcription start site region 116619
Tssr116620 12 72628851 to 72628866 15 - TSS region transcription start site region 116620
Tssr116621 12 72628868 to 72628887 19 - TSS region transcription start site region 116621
Tssr116622 12 72628896 to 72628907 11 - TSS region transcription start site region 116622
Tssr116623 12 72628929 to 72628938 9 - TSS region transcription start site region 116623
Tssr116624 12 72628956 to 72628965 9 - TSS region transcription start site region 116624
Dhrs7 12 72650353 to 72664828 14475 - protein coding gene dehydrogenase/reductase (SDR family) member 7
D12Mit274 12 72651766 to 72651889 123 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 274
Cpgi4734 12 72655875 to 72656054 179 CpG island CpG island 4734