Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:72091319-72382129

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jkamp 12 72085839 to 72101527 15688 + protein coding gene JNK1/MAPK8-associated membrane protein
Gm19135 12 72096432 to 72098104 1672 + pseudogene predicted gene, 19135
Ccdc175 12 72101300 to 72185029 83729 - protein coding gene coiled-coil domain containing 175
Tssr116589 12 72116259 to 72116264 5 - TSS region transcription start site region 116589
Gm18243 12 72120912 to 72121795 883 - pseudogene predicted gene, 18243
Gm24466 12 72130210 to 72130318 108 - miRNA gene predicted gene, 24466
Tssr116590 12 72178740 to 72178752 12 - TSS region transcription start site region 116590
Cpgi4727 12 72184875 to 72185076 201 CpG island CpG island 4727
Tssr116591 12 72184990 to 72185033 43 - TSS region transcription start site region 116591
Rtn1 12 72211752 to 72409054 197302 - protein coding gene reticulon 1
Tssr116592 12 72211901 to 72211913 12 - TSS region transcription start site region 116592
Tssr116593 12 72212154 to 72212177 23 - TSS region transcription start site region 116593
Tssr116594 12 72212191 to 72212202 11 - TSS region transcription start site region 116594
Tssr116595 12 72212206 to 72212257 51 - TSS region transcription start site region 116595
Tssr113741 12 72212283 to 72212296 13 + TSS region transcription start site region 113741
Tssr113742 12 72212297 to 72212320 23 + TSS region transcription start site region 113742
Tssr116596 12 72212339 to 72212405 66 - TSS region transcription start site region 116596
Tssr116597 12 72212412 to 72212422 10 - TSS region transcription start site region 116597
Tssr116598 12 72212478 to 72212506 28 - TSS region transcription start site region 116598
Tssr116599 12 72212515 to 72212524 9 - TSS region transcription start site region 116599
Tssr116600 12 72212527 to 72212542 15 - TSS region transcription start site region 116600
Tssr116601 12 72212561 to 72212574 13 - TSS region transcription start site region 116601
Tssr116602 12 72216795 to 72216830 35 - TSS region transcription start site region 116602
Tssr116603 12 72219280 to 72219304 24 - TSS region transcription start site region 116603
Tssr116604 12 72223399 to 72223425 26 - TSS region transcription start site region 116604
Cpgi4728 12 72223438 to 72223659 221 CpG island CpG island 4728
Cpgi4729 12 72236319 to 72237129 810 CpG island CpG island 4729
Tssr116605 12 72236666 to 72236684 18 - TSS region transcription start site region 116605
Tssr116606 12 72236692 to 72236708 16 - TSS region transcription start site region 116606
Tglq6 12 72291461 to 72291675 214 QTL triglyceride QTL 6
D12Mit201 12 72291461 to 72291675 214 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 201
Cpgi4730 12 72303776 to 72304232 456 CpG island CpG island 4730
Tssr116607 12 72374324 to 72374348 24 - TSS region transcription start site region 116607
Tssr116608 12 72375087 to 72375097 10 - TSS region transcription start site region 116608
Tssr116609 12 72375128 to 72375138 10 - TSS region transcription start site region 116609