Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:53153217-53343240

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Akap6 12 52699383 to 53155599 456216 + protein coding gene A kinase (PRKA) anchor protein 6
Cpgi4599 12 53246501 to 53246652 151 CpG island CpG island 4599
Cpgi4600 12 53247764 to 53249122 1358 CpG island CpG island 4600
Tssr113461 12 53248217 to 53248240 23 + TSS region transcription start site region 113461
Tssr113462 12 53248399 to 53248421 22 + TSS region transcription start site region 113462
Tssr113463 12 53248423 to 53248474 51 + TSS region transcription start site region 113463
Npas3 12 53248677 to 54072175 823498 + protein coding gene neuronal PAS domain protein 3
Cpgi4601 12 53251872 to 53252036 164 CpG island CpG island 4601
Cpgi4602 12 53252326 to 53253738 1412 CpG island CpG island 4602
Tssr113464 12 53252609 to 53252649 40 + TSS region transcription start site region 113464
D12Mit65 12 53260239 to 53260397 158 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 65
Tssr3841 12 53284081 to 53284086 5 + TSS region transcription start site region 3841
1700030L22Rik 12 53303352 to 53309846 6494 - antisense lncRNA gene RIKEN cDNA 1700030L22 gene
Tssr116287 12 53309836 to 53309865 29 - TSS region transcription start site region 116287