Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:37961943-40051951

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dgkb 12 37880168 to 38634239 754071 + protein coding gene diacylglycerol kinase, beta
Tssr113276 12 38036776 to 38036778 2 + TSS region transcription start site region 113276
Gm48715 12 38047093 to 38075735 28642 - antisense lncRNA gene predicted gene, 48715
Gm35755 12 38089902 to 38092463 2561 + pseudogene predicted gene, 35755
Tssr113277 12 38123871 to 38123877 6 + TSS region transcription start site region 113277
Gm18338 12 38368671 to 38369230 559 - pseudogene predicted gene, 18338
C030045M22Rik 12 38501446 to 38502569 1123 unclassified gene RIKEN cDNA C030045M22 gene
8030450B20Rik 12 38517546 to 38520304 2758 unclassified gene RIKEN cDNA 8030450B20 gene
Tssr113278 12 38545292 to 38545296 4 + TSS region transcription start site region 113278
4930428E07Rik 12 38552809 to 38614521 61712 - antisense lncRNA gene RIKEN cDNA 4930428E07 gene
Gm48813 12 38707869 to 38708570 701 + pseudogene predicted gene, 48813
Tssr113279 12 38730109 to 38730114 5 + TSS region transcription start site region 113279
Tssr116146 12 38730825 to 38730832 7 - TSS region transcription start site region 116146
Gm4257 12 38741701 to 38742210 509 - pseudogene predicted gene 4257
D12Mit222 12 38777282 to 38777393 111 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 222
D12Mit186 12 38777282 to 38777408 126 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 186
Cpgi4566 12 38778552 to 38779139 587 CpG island CpG island 4566
Etv1 12 38779656 to 38868215 88559 + protein coding gene ets variant 1
Tssr113280 12 38780104 to 38780117 13 + TSS region transcription start site region 113280
Tssr113281 12 38780254 to 38780261 7 + TSS region transcription start site region 113281
Tssr113282 12 38780286 to 38780326 40 + TSS region transcription start site region 113282
Tssr113283 12 38780817 to 38780854 37 + TSS region transcription start site region 113283
Tssr3827 12 38781073 to 38781088 15 + TSS region transcription start site region 3827
Tssr113284 12 38781093 to 38781128 35 + TSS region transcription start site region 113284
Tssr3828 12 38783417 to 38783420 3 + TSS region transcription start site region 3828
Tssr113285 12 38783455 to 38783482 27 + TSS region transcription start site region 113285
Tssr113286 12 38783488 to 38783495 7 + TSS region transcription start site region 113286
Tssr113287 12 38783503 to 38783527 24 + TSS region transcription start site region 113287
Tssr113288 12 38783619 to 38783662 43 + TSS region transcription start site region 113288
Tssr113289 12 38783673 to 38783684 11 + TSS region transcription start site region 113289
Tssr113290 12 38783703 to 38783722 19 + TSS region transcription start site region 113290
Tssr113291 12 38784367 to 38784411 44 + TSS region transcription start site region 113291
Tssr113292 12 38829753 to 38829757 4 + TSS region transcription start site region 113292
Tssr113293 12 38861017 to 38861026 9 + TSS region transcription start site region 113293
Tssr113294 12 38861027 to 38861066 39 + TSS region transcription start site region 113294
Tssr113295 12 38868024 to 38868039 15 + TSS region transcription start site region 113295
Tssr113296 12 38868151 to 38868158 7 + TSS region transcription start site region 113296
Gm18442 12 38875450 to 38876024 574 + pseudogene predicted gene, 18442
Gm34611 12 38906055 to 38906953 898 - lincRNA gene predicted gene, 34611
Gm47832 12 38936413 to 38937049 636 - pseudogene predicted gene, 47832
Gm34662 12 38982438 to 38984000 1562 - lincRNA gene predicted gene, 34662
Tssr113297 12 38998542 to 38998546 4 + TSS region transcription start site region 113297
Gm19563 12 38998654 to 38998923 269 + pseudogene predicted gene, 19563
Tssr116147 12 39006943 to 39006951 8 - TSS region transcription start site region 116147
Gm34809 12 39074465 to 39154735 80270 - lincRNA gene predicted gene, 34809
Skts5 12 39098867 to 39099017 150 QTL skin tumor susceptibility 5
D12Mit154 12 39098867 to 39099017 150 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 154
Gm18591 12 39208892 to 39209654 762 + pseudogene predicted gene, 18591
Gm47855 12 39397653 to 39398556 903 - lincRNA gene predicted gene, 47855
Gm24069 12 39461530 to 39461656 126 + snoRNA gene predicted gene, 24069
Gm34923 12 39490689 to 39526901 36212 - lincRNA gene predicted gene, 34923
Gm47859 12 39515934 to 39521395 5461 - lincRNA gene predicted gene, 47859
Gm24434 12 39621415 to 39621546 131 + snoRNA gene predicted gene, 24434
Gm18116 12 39765186 to 39765722 536 + pseudogene predicted gene, 18116
Gm4263 12 39874770 to 39875939 1169 + pseudogene predicted gene 4263
Gm47868 12 39899010 to 39922859 23849 - lincRNA gene predicted gene, 47868
Tssr113298 12 39941581 to 39941584 3 + TSS region transcription start site region 113298
Gm40399 12 39942477 to 39950626 8149 - lncRNA gene predicted gene, 40399
Gm18939 12 39948444 to 39949124 680 - pseudogene predicted gene, 18939
Tssr116148 12 39975033 to 39975037 4 - TSS region transcription start site region 116148
Bmiq11 12 40000000 to 8000000 -32000000 QTL body mass index QTL 11
Tssr116149 12 40014482 to 40014494 12 - TSS region transcription start site region 116149
Cpgi4567 12 40017100 to 40017290 190 CpG island CpG island 4567
Arl4a 12 40033291 to 40037987 4696 - protein coding gene ADP-ribosylation factor-like 4A
Cpgi4568 12 40037087 to 40038522 1435 CpG island CpG island 4568
Tssr116150 12 40037368 to 40037382 14 - TSS region transcription start site region 116150
Tssr116151 12 40037387 to 40037411 24 - TSS region transcription start site region 116151
Tssr116152 12 40037624 to 40037630 6 - TSS region transcription start site region 116152
Tssr116153 12 40037655 to 40037667 12 - TSS region transcription start site region 116153
Tssr116154 12 40037919 to 40038013 94 - TSS region transcription start site region 116154
Tssr116155 12 40038030 to 40038041 11 - TSS region transcription start site region 116155
Tssr113299 12 40038070 to 40038091 21 + TSS region transcription start site region 113299
Tssr113300 12 40038093 to 40038107 14 + TSS region transcription start site region 113300
Arl4aos 12 40038099 to 40040027 1928 + antisense lncRNA gene ADP-ribosylation factor-like 4A, opposite strand
Tssr113301 12 40038109 to 40038118 9 + TSS region transcription start site region 113301
Tssr116156 12 40038210 to 40038222 12 - TSS region transcription start site region 116156
Tssr113302 12 40038321 to 40038335 14 + TSS region transcription start site region 113302