Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:36368424-37569150

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm25438 12 36373774 to 36373883 109 - snoRNA gene predicted gene, 25438
D630036H23Rik 12 36381242 to 36382181 939 - protein coding gene RIKEN cDNA D630036H23 gene
Cpgi4562 12 36381446 to 36382255 809 CpG island CpG island 4562
Crppa 12 36381450 to 36689503 308053 + protein coding gene CDP-L-ribitol pyrophosphorylase A
Tssr113238 12 36381548 to 36381594 46 + TSS region transcription start site region 113238
Tssr113239 12 36532790 to 36532799 9 + TSS region transcription start site region 113239
Gm7252 12 36539357 to 36539812 455 + pseudogene predicted gene 7252
Tssr3826 12 36569911 to 36569913 2 + TSS region transcription start site region 3826
Tssr113240 12 36607464 to 36607468 4 + TSS region transcription start site region 113240
Tssr116142 12 36627395 to 36627413 18 - TSS region transcription start site region 116142
Tssr113241 12 36676718 to 36676727 9 + TSS region transcription start site region 113241
Tssr113242 12 36676750 to 36676758 8 + TSS region transcription start site region 113242
Tssr113243 12 36677323 to 36677344 21 + TSS region transcription start site region 113243
Tssr113244 12 36677368 to 36677369 1 + TSS region transcription start site region 113244
Edlmmq10 12 36689834 to 36689834 0 QTL extensor digitorum longus muscle mass QTL 10
D12Mit271 12 36800215 to 36800333 118 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 271
Mir5099 12 36816205 to 36816278 73 + miRNA gene microRNA 5099
Tssr113245 12 36816248 to 36816249 1 + TSS region transcription start site region 113245
Cpgi4563 12 36816256 to 36816622 366 CpG island CpG island 4563
Gm40394 12 36882971 to 36903014 20043 + lincRNA gene predicted gene, 40394
Gm48613 12 36945251 to 36952555 7304 - lincRNA gene predicted gene, 48613
Gm18026 12 36968424 to 36969150 726 - pseudogene predicted gene, 18026
Gm44326 12 37001839 to 37001939 100 - miRNA gene predicted gene, 44326
Gm48616 12 37013575 to 37089385 75810 + lincRNA gene predicted gene, 48616
Tssr113246 12 37013577 to 37013598 21 + TSS region transcription start site region 113246
Gm48617 12 37049217 to 37147149 97932 + sense intronic lncRNA gene predicted gene, 48617
Tssr116143 12 37081865 to 37081868 3 - TSS region transcription start site region 116143
Gm29007 12 37098550 to 37106789 8239 - lincRNA gene predicted gene 29007
Tssr116144 12 37106750 to 37106757 7 - TSS region transcription start site region 116144
Cpgi4564 12 37108226 to 37109777 1551 CpG island CpG island 4564
Tssr113247 12 37108533 to 37108546 13 + TSS region transcription start site region 113247
Meox2 12 37108546 to 37179528 70982 + protein coding gene mesenchyme homeobox 2
Tssr113248 12 37108554 to 37108607 53 + TSS region transcription start site region 113248
Tssr113249 12 37108616 to 37108631 15 + TSS region transcription start site region 113249
Tssr113250 12 37108632 to 37108643 11 + TSS region transcription start site region 113250
Tssr113251 12 37108661 to 37108673 12 + TSS region transcription start site region 113251
Tssr113252 12 37241620 to 37241631 11 + TSS region transcription start site region 113252
Tssr113253 12 37241633 to 37241654 21 + TSS region transcription start site region 113253
Agmo 12 37241639 to 37581932 340293 + protein coding gene alkylglycerol monooxygenase
Tssr113254 12 37241668 to 37241683 15 + TSS region transcription start site region 113254
Tssr113255 12 37241729 to 37241758 29 + TSS region transcription start site region 113255
Tssr113256 12 37241766 to 37241784 18 + TSS region transcription start site region 113256
Tssr113257 12 37241804 to 37241897 93 + TSS region transcription start site region 113257
Tssr113258 12 37241899 to 37241904 5 + TSS region transcription start site region 113258
Tssr113259 12 37241905 to 37241921 16 + TSS region transcription start site region 113259
Tssr113260 12 37241925 to 37241939 14 + TSS region transcription start site region 113260
Tssr113261 12 37242001 to 37242008 7 + TSS region transcription start site region 113261
Tssr113262 12 37242030 to 37242039 9 + TSS region transcription start site region 113262
Tssr113263 12 37242065 to 37242098 33 + TSS region transcription start site region 113263
Tssr113264 12 37416687 to 37416690 3 + TSS region transcription start site region 113264
Gm34408 12 37446746 to 37475031 28285 - antisense lncRNA gene predicted gene, 34408
Tssr116145 12 37474989 to 37475004 15 - TSS region transcription start site region 116145