Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:32019070-32739101

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prkar2b 12 31958476 to 32061296 102820 - protein coding gene protein kinase, cAMP dependent regulatory, type II beta
Tssr116070 12 32057557 to 32057603 46 - TSS region transcription start site region 116070
Tssr116071 12 32058360 to 32058375 15 - TSS region transcription start site region 116071
Tssr116072 12 32058410 to 32058420 10 - TSS region transcription start site region 116072
Tssr113126 12 32059971 to 32059990 19 + TSS region transcription start site region 113126
Cpgi4539 12 32060330 to 32061608 1278 CpG island CpG island 4539
Tssr116073 12 32060944 to 32060951 7 - TSS region transcription start site region 116073
Tssr116074 12 32061194 to 32061208 14 - TSS region transcription start site region 116074
Tssr116075 12 32061221 to 32061301 80 - TSS region transcription start site region 116075
Tssr116076 12 32061305 to 32061317 12 - TSS region transcription start site region 116076
Gm33111 12 32073286 to 32080850 7564 - lincRNA gene predicted gene, 33111
Tssr116077 12 32080832 to 32080863 31 - TSS region transcription start site region 116077
5430401H09Rik 12 32096613 to 32123702 27089 - lincRNA gene RIKEN cDNA 5430401H09 gene
Obq34 12 32097332 to 32097332 0 QTL obesity QTL 34
Tssr116078 12 32109382 to 32109386 4 - TSS region transcription start site region 116078
D12Mit124 12 32112445 to 32112590 145 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 124
D12Mit124.1 12 32112666 to 32112786 120 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 124.1
Tssr116079 12 32123617 to 32123622 5 - TSS region transcription start site region 116079
Tssr116080 12 32123663 to 32123678 15 - TSS region transcription start site region 116080
Tssr116081 12 32123681 to 32123712 31 - TSS region transcription start site region 116081
Tssr116082 12 32123725 to 32123742 17 - TSS region transcription start site region 116082
Tssr116083 12 32123823 to 32123830 7 - TSS region transcription start site region 116083
Gm40374 12 32143367 to 32157217 13850 + lncRNA gene predicted gene, 40374
Pik3cg 12 32173473 to 32208659 35186 - protein coding gene phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma
Tssr116084 12 32185199 to 32185208 9 - TSS region transcription start site region 116084
D12Mit106 12 32187399 to 32187534 135 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 106
Cpgi4540 12 32205282 to 32205982 700 CpG island CpG island 4540
Tssr116085 12 32208201 to 32208230 29 - TSS region transcription start site region 116085
Tssr116086 12 32208332 to 32208400 68 - TSS region transcription start site region 116086
Tssr116087 12 32208503 to 32208514 11 - TSS region transcription start site region 116087
Tssr116088 12 32208527 to 32208542 15 - TSS region transcription start site region 116088
Tssr116089 12 32208559 to 32208572 13 - TSS region transcription start site region 116089
Tssr116090 12 32208609 to 32208683 74 - TSS region transcription start site region 116090
Gm47928 12 32219961 to 32220669 708 - pseudogene predicted gene, 47928
Gm33308 12 32246265 to 32248617 2352 + lincRNA gene predicted gene, 33308
Tssr113127 12 32246293 to 32246303 10 + TSS region transcription start site region 113127
D12Mit142 12 32283045 to 32283193 148 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 142
Gm23875 12 32354885 to 32355202 317 - unclassified non-coding RNA gene predicted gene, 23875
Cpgi4541 12 32378432 to 32379975 1543 CpG island CpG island 4541
Tssr113128 12 32378692 to 32378707 15 + TSS region transcription start site region 113128
Tssr113129 12 32378764 to 32378814 50 + TSS region transcription start site region 113129
Ccdc71l 12 32378789 to 32382943 4154 + protein coding gene coiled-coil domain containing 71 like
Tssr113130 12 32378872 to 32378895 23 + TSS region transcription start site region 113130
Tssr113131 12 32378911 to 32378929 18 + TSS region transcription start site region 113131
Tssr113132 12 32379070 to 32379101 31 + TSS region transcription start site region 113132
Tssr113133 12 32379131 to 32379178 47 + TSS region transcription start site region 113133
Tssr113134 12 32379221 to 32379234 13 + TSS region transcription start site region 113134
Tssr113135 12 32379745 to 32379756 11 + TSS region transcription start site region 113135
Tssr113136 12 32379905 to 32379940 35 + TSS region transcription start site region 113136
Gm40375 12 32390102 to 32399552 9450 - lincRNA gene predicted gene, 40375
4932429P19Rik 12 32428607 to 32431921 3314 unclassified gene RIKEN cDNA 4932429P19 gene
Gm17820 12 32486351 to 32487418 1067 - pseudogene predicted gene, 17820
Tssr116091 12 32487442 to 32487449 7 - TSS region transcription start site region 116091
Tssr116092 12 32569061 to 32569069 8 - TSS region transcription start site region 116092
Gm33380 12 32577719 to 32581504 3785 - lncRNA gene predicted gene, 33380
Gm18245 12 32672827 to 32673548 721 pseudogene predicted gene, 18245
Gm47937 12 32673180 to 32673294 114 - pseudogene predicted gene, 47937
Gm18726 12 32710161 to 32712532 2371 + pseudogene predicted gene, 18726
Gm40376 12 32724706 to 32771138 46432 + lncRNA gene predicted gene, 40376
Tssr113137 12 32724711 to 32724721 10 + TSS region transcription start site region 113137
Tssr113138 12 32724722 to 32724734 12 + TSS region transcription start site region 113138