Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:11361607-11511618

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vsnl1 12 11325242 to 11436613 111371 - protein coding gene visinin-like 1
Tssr115744 12 11386872 to 11386888 16 - TSS region transcription start site region 115744
Tssr115745 12 11435638 to 11435653 15 - TSS region transcription start site region 115745
Tssr3791 12 11436475 to 11436487 12 - TSS region transcription start site region 3791
Cpgi4418 12 11436489 to 11436772 283 CpG island CpG island 4418
Tssr115746 12 11436498 to 11436509 11 - TSS region transcription start site region 115746
Tssr3792 12 11436518 to 11436540 22 - TSS region transcription start site region 3792
Tssr115747 12 11436550 to 11436603 53 - TSS region transcription start site region 115747
Tssr115748 12 11436607 to 11436618 11 - TSS region transcription start site region 115748
Tssr3793 12 11436711 to 11436720 9 - TSS region transcription start site region 3793
Cpgi4419 12 11438020 to 11438277 257 CpG island CpG island 4419
Tssr112802 12 11438191 to 11438238 47 + TSS region transcription start site region 112802
4930511A02Rik 12 11438233 to 11444812 6579 + lincRNA gene RIKEN cDNA 4930511A02 gene
Cpgi4420 12 11455744 to 11456419 675 CpG island CpG island 4420
Tssr112803 12 11456052 to 11456058 6 + TSS region transcription start site region 112803
Rad51ap2 12 11456079 to 11462928 6849 + protein coding gene RAD51 associated protein 2
D12Mit168 12 11465395 to 11465581 186 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 168
Gm47807 12 11499295 to 11499892 597 + pseudogene predicted gene, 47807
Gm47808 12 11507226 to 11512390 5164 - unclassified non-coding RNA gene predicted gene, 47808