MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:10887813-11238741

Filter by:

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pgk1-rs7	12	10898986 to 10900240	1254	-	pseudogene	phosphoglycerate kinase-1, related sequence-7
Tssr115727	12	10900313 to 10900318	5	-	TSS region	transcription start site region 115727
Gm48082	12	10990354 to 10994195	3841	+	pseudogene	predicted gene, 48082
7420701I03Rik	12	11047813 to 11078741	30928	+	lincRNA gene	RIKEN cDNA 7420701I03 gene
Kcns3	12	11090202 to 11151056	60854	-	protein coding gene	potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
Gm48088	12	11099596 to 11100077	481	+	pseudogene	predicted gene, 48088
Tssr112785	12	11139498 to 11139499	1	+	TSS region	transcription start site region 112785
Cpgi4414	12	11149216 to 11150980	1764		CpG island	CpG island 4414
Tssr115728	12	11150305 to 11150348	43	-	TSS region	transcription start site region 115728
9530020I12Rik	12	11185993 to 11204502	18509	-	lincRNA gene	RIKEN cDNA 9530020I12 gene
Cpgi4415	12	11196188 to 11196490	302		CpG island	CpG island 4415
Tssr115729	12	11204286 to 11204303	17	-	TSS region	transcription start site region 115729
Tssr115730	12	11204305 to 11204325	20	-	TSS region	transcription start site region 115730
Tssr115731	12	11204375 to 11204387	12	-	TSS region	transcription start site region 115731
D12Mit240	12	11207819 to 11207931	112		DNA segment	DNA Segment, Chr 12, Massachusetts Institute of Technology 240
Msgn1	12	11208382 to 11208948	566	-	protein coding gene	mesogenin 1
Cpgi4416	12	11208445 to 11208786	341		CpG island	CpG island 4416
1700034J04Rik	12	11221461 to 11222210	749	-	unclassified gene	RIKEN cDNA 1700034J04 gene