Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:106621475-107641487

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr117615 12 106634510 to 106634517 7 - TSS region transcription start site region 117615
Gm46320 12 106634705 to 106672087 37382 + protein coding gene predicted gene, 46320
Cpgi5068 12 106681929 to 106682135 206 CpG island CpG island 5068
4933406K04Rik 12 106685607 to 106716324 30717 - lincRNA gene RIKEN cDNA 4933406K04 gene
D12Mit27 12 106697812 to 106698092 280 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 27
Mobq3 12 106697812 to 106698092 280 QTL multigenic obesity QTL 3
Tssr117616 12 106716296 to 106716306 10 - TSS region transcription start site region 117616
Tssr117617 12 106716323 to 106716336 13 - TSS region transcription start site region 117617
Tssr117618 12 106716341 to 106716344 3 - TSS region transcription start site region 117618
Tssr117619 12 106716346 to 106716366 20 - TSS region transcription start site region 117619
Gm40569 12 106836879 to 106839888 3009 + lncRNA gene predicted gene, 40569
1700013N06Rik 12 106865355 to 106878883 13528 + lincRNA gene RIKEN cDNA 1700013N06 gene
Gm9599 12 106886446 to 106886926 480 - pseudogene predicted gene 9599
D12Mit207.1 12 106913409 to 106913544 135 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 207.1
D12Mit207 12 106913529 to 106913729 200 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 207
Gm16087 12 106953814 to 106955109 1295 - lincRNA gene predicted gene 16087
D12Mit132 12 106972772 to 106972901 129 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 132
Heal5 12 106972772 to 106972901 129 QTL wound healing/regeneration 5
5830406C21Rik 12 107070897 to 107073453 2556 unclassified gene RIKEN cDNA 5830406C21 gene
Gm16086 12 107079360 to 107099673 20313 - lincRNA gene predicted gene 16086
Gm46321 12 107111059 to 107112147 1088 - protein coding gene predicted gene, 46321
Tssr117620 12 107123708 to 107123720 12 - TSS region transcription start site region 117620
Tssr114936 12 107124441 to 107124456 15 + TSS region transcription start site region 114936
Tssr114937 12 107129658 to 107129669 11 + TSS region transcription start site region 114937
Gm16085 12 107129681 to 107132576 2895 + lincRNA gene predicted gene 16085
Tssr117621 12 107131475 to 107131487 12 - TSS region transcription start site region 117621
Tssr117622 12 107131514 to 107131523 9 - TSS region transcription start site region 117622
Tssr117623 12 107131918 to 107131926 8 - TSS region transcription start site region 117623
Tssr114938 12 107141504 to 107141517 13 + TSS region transcription start site region 114938
Tssr114939 12 107141558 to 107141568 10 + TSS region transcription start site region 114939
Tssr117624 12 107146786 to 107146792 6 - TSS region transcription start site region 117624
Gm16084 12 107147164 to 107160207 13043 - lincRNA gene predicted gene 16084
Tssr117625 12 107157156 to 107157171 15 - TSS region transcription start site region 117625
Tssr114940 12 107157336 to 107157372 36 + TSS region transcription start site region 114940
Tssr114941 12 107159728 to 107159732 4 + TSS region transcription start site region 114941
Tssr114942 12 107183548 to 107183566 18 + TSS region transcription start site region 114942
Gm2800 12 107183555 to 107186734 3179 + lincRNA gene predicted gene 2800
Cpgi5069 12 107183704 to 107183866 162 CpG island CpG island 5069
D12Mit122 12 107203137 to 107203286 149 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 122
Gm5187 12 107205076 to 107206066 990 - pseudogene predicted gene 5187
Tssr114943 12 107225535 to 107225538 3 + TSS region transcription start site region 114943
Bbaa6 12 107342009 to 107342134 125 QTL B.burgdorferi-associated arthritis 6
D12Mit139 12 107342009 to 107342134 125 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 139
Bbaa27 12 107342134 to 91287446 -16054688 QTL B.burgdorferi-associated arthritis 27
Tssr114944 12 107379056 to 107379057 1 + TSS region transcription start site region 114944
Gm17052 12 107419141 to 107419429 288 + pseudogene predicted gene 17052
D12Mit53 12 107459086 to 107459221 135 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 53
Gm3234 12 107463269 to 107488583 25314 - lincRNA gene predicted gene 3234
3110018I06Rik 12 107488632 to 107489636 1004 + unclassified gene RIKEN cDNA 3110018I06 gene
Gm9006 12 107613000 to 107613840 840 + pseudogene predicted gene 9006
Gm33236 12 107624195 to 107649915 25720 - lncRNA gene predicted gene, 33236