MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:105011359-105039936

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm46375	12	105012683 to 105023679	10996	-	lncRNA gene	predicted gene, 46375
Tssr3936	12	105013113 to 105013140	27	-	TSS region	transcription start site region 3936
Tssr114894	12	105019496 to 105019506	10	+	TSS region	transcription start site region 114894
Tssr114895	12	105019531 to 105019557	26	+	TSS region	transcription start site region 114895
Tssr114896	12	105020113 to 105020143	30	+	TSS region	transcription start site region 114896
Gm47648	12	105021359 to 105029936	8577	+	lincRNA gene	predicted gene, 47648
Gm47650	12	105027642 to 105027963	321	-	pseudogene	predicted gene, 47650
Snhg10	12	105030617 to 105032279	1662	-	lncRNA gene	small nucleolar RNA host gene 10
Scarna13	12	105031075 to 105031349	274	-	snoRNA gene	small Cajal body-specific RNA 1
Mir3069	12	105031077 to 105031141	64	-	miRNA gene	microRNA 3069
Cpgi5038	12	105032019 to 105033250	1231		CpG island	CpG island 5038
Tssr117599	12	105032056 to 105032060	4	-	TSS region	transcription start site region 117599
Tssr117600	12	105032240 to 105032258	18	-	TSS region	transcription start site region 117600
Tssr117601	12	105032261 to 105032307	46	-	TSS region	transcription start site region 117601
Glrx5	12	105032618 to 105040911	8293	+	protein coding gene	glutaredoxin 5
Tssr114897	12	105032638 to 105032705	67	+	TSS region	transcription start site region 114897
Gm46374	12	105036168 to 105040268	4100	-	lncRNA gene	predicted gene, 46374
D12Mit29	12	105039595 to 105039857	262		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 29