Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:104581900-104921937

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5032 12 104584042 to 104584382 340 CpG island CpG island 5032
Cpgi5033 12 104593423 to 104593811 388 CpG island CpG island 5033
Cpgi5034 12 104606085 to 104606370 285 CpG island CpG island 5034
Gm31573 12 104661424 to 104662697 1273 - lncRNA gene predicted gene, 31573
Tssr114883 12 104683466 to 104683485 19 + TSS region transcription start site region 114883
Dicer1 12 104687742 to 104751952 64210 - protein coding gene dicer 1, ribonuclease type III
Cpgi5035 12 104751077 to 104752692 1615 CpG island CpG island 5035
Tssr117580 12 104751900 to 104751937 37 - TSS region transcription start site region 117580
Tssr117581 12 104752025 to 104752115 90 - TSS region transcription start site region 117581
Tssr114884 12 104752180 to 104752224 44 + TSS region transcription start site region 114884
Tssr117582 12 104761506 to 104761524 18 - TSS region transcription start site region 117582
Tssr114885 12 104761626 to 104761639 13 + TSS region transcription start site region 114885
Clmn 12 104763117 to 104865076 101959 - protein coding gene calmin
D12Mit195.2 12 104800995 to 104801126 131 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 195.2
D12Mit195 12 104801109 to 104801248 139 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 195
D12Mit195.1 12 104801216 to 104801327 111 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 195.1
Tssr114886 12 104819234 to 104819258 24 + TSS region transcription start site region 114886
Tssr114887 12 104820279 to 104820324 45 + TSS region transcription start site region 114887
Tssr117583 12 104856492 to 104856505 13 - TSS region transcription start site region 117583
Tssr117584 12 104856629 to 104856636 7 - TSS region transcription start site region 117584
Tssr114888 12 104857079 to 104857085 6 + TSS region transcription start site region 114888
4930408O17Rik 12 104857371 to 104871535 14164 + lincRNA gene RIKEN cDNA 4930408O17 gene
Tssr114889 12 104862066 to 104862076 10 + TSS region transcription start site region 114889
Tssr3933 12 104862089 to 104862096 7 + TSS region transcription start site region 3933
Cpgi5036 12 104864389 to 104865635 1246 CpG island CpG island 5036
Tssr117585 12 104864957 to 104864991 34 - TSS region transcription start site region 117585
Tssr117586 12 104865007 to 104865029 22 - TSS region transcription start site region 117586
Tssr117587 12 104865038 to 104865052 14 - TSS region transcription start site region 117587
Tssr117588 12 104865082 to 104865138 56 - TSS region transcription start site region 117588
Tssr117589 12 104865150 to 104865163 13 - TSS region transcription start site region 117589
Tssr117590 12 104865189 to 104865198 9 - TSS region transcription start site region 117590
Tssr114890 12 104865376 to 104865400 24 + TSS region transcription start site region 114890