Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:104446085-104766370

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5025 12 104446794 to 104447420 626 CpG island CpG island 5025
Cpgi5026 12 104471200 to 104473734 2534 CpG island CpG island 5026
Gsc 12 104471209 to 104473236 2027 - protein coding gene goosecoid homeobox
Tssr117576 12 104473236 to 104473254 18 - TSS region transcription start site region 117576
Gm10000 12 104473331 to 104477759 4428 + bidirectional promoter lncRNA gene predicted gene 10000
Tssr117577 12 104473366 to 104473373 7 - TSS region transcription start site region 117577
Cpgi5027 12 104474341 to 104474955 614 CpG island CpG island 5027
Cpgi5028 12 104475956 to 104476375 419 CpG island CpG island 5028
Gm49732 12 104509198 to 104525977 16779 + lincRNA gene predicted gene, 49732
Tssr117578 12 104512657 to 104512659 2 - TSS region transcription start site region 117578
D12Mit100 12 104530304 to 104530397 93 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 100
Cpgi5029 12 104531732 to 104531994 262 CpG island CpG island 5029
Cpgi5030 12 104546056 to 104546259 203 CpG island CpG island 5030
Tssr117579 12 104561772 to 104561796 24 - TSS region transcription start site region 117579
Cpgi5031 12 104568254 to 104568568 314 CpG island CpG island 5031
D12Mit290 12 104573023 to 104573115 92 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 290
Cpgi5032 12 104584042 to 104584382 340 CpG island CpG island 5032
Cpgi5033 12 104593423 to 104593811 388 CpG island CpG island 5033
Cpgi5034 12 104606085 to 104606370 285 CpG island CpG island 5034
Gm31573 12 104661424 to 104662697 1273 - lncRNA gene predicted gene, 31573
Tssr114883 12 104683466 to 104683485 19 + TSS region transcription start site region 114883
Dicer1 12 104687742 to 104751952 64210 - protein coding gene dicer 1, ribonuclease type III
Cpgi5035 12 104751077 to 104752692 1615 CpG island CpG island 5035
Tssr117580 12 104751900 to 104751937 37 - TSS region transcription start site region 117580
Tssr117581 12 104752025 to 104752115 90 - TSS region transcription start site region 117581
Tssr114884 12 104752180 to 104752224 44 + TSS region transcription start site region 114884
Tssr117582 12 104761506 to 104761524 18 - TSS region transcription start site region 117582
Tssr114885 12 104761626 to 104761639 13 + TSS region transcription start site region 114885
Clmn 12 104763117 to 104865076 101959 - protein coding gene calmin